Evidence map›Paper›PMID 14517302›Full record

ArticleMolecular and cellular biology2003

Rds3p is required for stable U2 snRNP recruitment to the splicing apparatus.

Qiang Wang, Brian C Rymond

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural and functional modularity of the U2 snRNP in pre-mRNA splicing.Critical reviews in biochemistry and molecular biology · 2019
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Solution structure of the U2 snRNP protein Rds3p reveals a knotted zinc-finger motif.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  12. Article
  13. A fungal family of transcriptional regulators: the zinc cluster proteins.Microbiology and molecular biology reviews : MMBR · 2006
    Review
  14. Article
  15. Article
  16. Article
  17. Interactions of the yeast SF3b splicing factor.Molecular and cellular biology · 2005
    Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Qiang WangDepartment of Biology, University of Kentucky, Lexington, Kentucky 40506-0225, USA.
Brian C Rymond
University of Kentucky · US

Funding

FUNCTION OF SNRNP PARTICLES IN PREMRNA SPLICINGR01GM042476 · NIGMS · UNIVERSITY OF KENTUCKY · PI RYMOND, BRIAN C. · 1995 to 2007
$1.7M
FUNCTION OF SNRNP PARTICLES IN PRE-MRNA SPLICINGR29GM042476 · NIGMS · UNIVERSITY OF KENTUCKY · PI RYMOND, BRIAN C. · 1989 to 1993
–
NIGMS NIH HHS GM42476NIGMS NIH HHS R01 GM042476
6 · The paper itself

Abstract

Rds3p is a well-conserved 12-kDa protein with five CxxC zinc fingers that has been implicated in the activation of certain drug transport genes and in the pre-mRNA splicing pathway. Here we show that Rds3p resides in the yeast spliceosome and is essential for splicing in vitro. Rds3p purified from yeast stably associates with at least five U2 snRNP proteins, Cus1p, Hsh49p, Hsh155p, Rse1p, and Ist3p/Snu17p, and with the Yra1p RNA export factor. A mutation upstream of the first Rds3p zinc finger causes the conditional release of the putative branchpoint nucleotide binding protein, Ist3p/Snu17p, and weakens Rse1p interaction with the Rds3p complex. The resultant U2 snRNP particle migrates exceptionally slowly in polyacrylamide gels, suggestive of a disorganized structure. U2 snRNPs depleted of Rds3p fail to form stable prespliceosomes, although U2 snRNA stability is not affected. Metabolic depletion of Yra1p blocks cell growth but not splicing, suggesting that Yra1p association with Rds3p relates to Yra1p's role in RNA trafficking. Together these data establish Rds3p as an essential component of the U2 snRNP SF3b complex and suggest a new link between the nuclear processes of pre-mRNA splicing and RNA export.

Indexed as

RNA SplicingAlternative SplicingBlotting, NorthernCarrier ProteinsDNA Mutational AnalysisElectrophoresis, Polyacrylamide GelModels, GeneticMutationRibonucleoproteins, Small NuclearRibonucleoprotein, U2 Small NuclearRNARNA, MessengerSaccharomyces cerevisiae ProteinsSpliceosomesTemperatureZinc FingersCarrier ProteinsIST3 protein, S cerevisiaeRDS3 protein, S cerevisiaeRibonucleoproteins, Small NuclearRibonucleoprotein, U2 Small NuclearRNARNA, MessengerRSE1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID14517302
PMCPMC230326
OpenAlexW2037122384

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.