Evidence map›Paper›PMID 14517250›Full record

ArticleThe EMBO journal2003

CIITA regulates transcription onset viaSer5-phosphorylation of RNA Pol II.

Charalambos Spilianakis, Androniki Kretsovali, Theodora Agalioti, Takis Makatounakis, Dimitris Thanos, Joseph Papamatheakis

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 88 citations in OpenAlex.

  1. Pooled it
  2. Review
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  6. Morphology of nuclear transcription.Histochemistry and cell biology · 2016
    Review
  7. Overview of CDK9 as a target in cancer research.Cell cycle (Georgetown, Tex.) · 2016
    Review
  8. Metastatic melanoma cells evade immune detection by silencing STAT1.International journal of molecular sciences · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Charalambos SpilianakisDepartment of Biology, University of Crete, Crete, Greece.
Androniki Kretsovali
Theodora Agalioti
Takis Makatounakis
Dimitris Thanos
Joseph Papamatheakis
University of Crete · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe the temporal order of recruitment of transcription factors, cofactors and basal transcriptional components and the consequent biochemical events that lead to activation of the major histocompatibility class II (MHCII) DRA gene transcription by IFN-gamma. We found that the gene is 'poised' for activation since both the activators and a fraction of the basal transcriptional machinery are pre-assembled at the enhancer and promoter prior to IFN-gamma treatment. The class II transactivator is synthesized following IFN-gamma treatment and it is recruited to the enhanceosome leading to the subsequent recruitment of the CBP and GCN5 coactivators. This is followed by histone acetylation and recruitment of the SWI/SNF chromatin remodeling complex. CIITA also recruits the CDK7 and CDK9 kinases and enhances the ability of CDK7 to phosphorylate Pol II at Ser5 leading to initiation of mRNA synthesis. Thus, the gene-specific class II transactivator selects the target genes for expression by coordinating a multiple set of biochemical activities ranging from chromatin alterations and pre-initiation complex assembly to promoter clearance.

Indexed as

Nuclear ProteinsAnimalsCOS CellsHeLa CellsHumansPhosphorylationPromoter Regions, GeneticRNA Polymerase IISerineTrans-ActivatorsTranscription, GeneticMHC class II transactivator proteinNuclear ProteinsRNA Polymerase IISerineTrans-Activators

Identifiers

PMID14517250
PMCPMC204479
OpenAlexW2012425092

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.