Evidence map›Paper›PMID 14517229›Full record

ArticleThe EMBO journal2003

The PB1 domain and the PC motif-containing region are structurally similar protein binding modules.

Sosuke Yoshinaga, Motoyuki Kohjima, Kenji Ogura, Masashi Yokochi, Ryu Takeya, Takashi Ito, Hideki Sumimoto, Fuyuhiko Inagaki

Abstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Sosuke YoshinagaDepartment of Structural Biology, Graduate School of Pharmaceutical Sciences, Hokkaido University, N12, W6, Kita-ku, Sapporo 060-0812, Japan.
Motoyuki Kohjima
Kenji Ogura
Masashi Yokochi
Ryu Takeya
Takashi Ito
Hideki Sumimoto
Fuyuhiko Inagaki

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The PC motif is evolutionarily conserved together with the PB1 domain, a binding partner of the PC motif-containing protein. For interaction with the PB1 domain, the PC motif-containing region (PCCR) comprising the PC motif and its flanking regions is required. Because the PB1 domain and the PCCR are novel binding modules found in a variety of signaling proteins, their structural and functional characterization is crucial. Bem1p and Cdc24p interact through the PB1-PCCR interaction and regulate cell polarization in budding yeast. Here, we determined a tertiary structure of the PCCR of Cdc24p by NMR. The tertiary structure of the PCCR is similar to that of the PB1 domain of Bem1p, which is classified into a ubiquitin fold. The PC motif portion takes a compact betabetaalpha-fold, presented on the ubiquitin scaffold. Mutational studies indicate that the PB1-PCCR interaction is mainly electrostatic. Based on the structural information, we group the PB1 domains and the PCCRs into a novel family, named the PB1 family. Thus, the PB1 family proteins form a specific dimer with each other.

Indexed as

Amino Acid MotifsGuanine Nucleotide Exchange FactorsProtein Structure, TertiarySaccharomyces cerevisiae ProteinsAmino Acid SequenceCell Cycle ProteinsMagnetic Resonance SpectroscopyMolecular Sequence DataProto-Oncogene ProteinsCDC24 protein, S cerevisiaeCell Cycle ProteinsGuanine Nucleotide Exchange FactorsProto-Oncogene ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID14517229
PMCPMC204459

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.