Evidence map›Paper›PMID 14507719›Full record

ArticleBiophysical journal2003

Quantitative analysis of the fluorescence properties of intrinsically fluorescent proteins in living cells.

Samuel T Hess, Erin D Sheets, Alice Wagenknecht-Wiesner, Ahmed A Heikal

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
6.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Investigating State Restriction in Fluorescent Protein FRET Using Time-Resolved Fluorescence and Anisotropy.The journal of physical chemistry. C, Nanomaterials and interfaces · 2017
    Article
  13. Article
  14. Article
  15. Phasor approach to fluorescence lifetime microscopy distinguishes different metabolic states of germ cells in a live tissue.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Samuel T HessSchool of Applied and Engineering Physics, Nanobiotechnology Center, Cornell University, Ithaca, New York 14853, USA.
Erin D Sheets
Alice Wagenknecht-Wiesner
Ahmed A Heikal
Cornell University · US

Funding

TRAINING IN MOLECULAR PHYSICS OF BIOLOGICAL SYSTEMST32GM008267 · NIGMS · CORNELL UNIVERSITY ITHACA · PI WANG, MICHELLE D. · 1988 to 2021
$9.6M
STUCTURE-FUNCTION RELATIONSHIPS OF IMMUNORECEPTORSR01AI018306 · NIAID · CORNELL UNIVERSITY ITHACA · PI BAIRD, BARBARA A · 1985 to 2014
$5.3M
NIAID NIH HHS AI18306NIAID NIH HHS R01 AI018306NIBIB NIH HHS 9-P41-EB0011976-16NIGMS NIH HHS GM08267NIGMS NIH HHS T32 GM008267
6 · The paper itself

Abstract

The main potential of intrinsically fluorescent proteins (IFPs), as noninvasive and site-specific markers, lies in biological applications such as intracellular visualization and molecular genetics. However, photophysical studies of IFPs have been carried out mainly in aqueous solution. Here, we provide a comprehensive analysis of the intracellular environmental effects on the steady-state spectroscopy and excited-state dynamics of green (EGFP) and red (DsRed) fluorescent proteins, using both one- and two-photon excitation. EGFP and DsRed are expressed either in the cytoplasm of rat basophilic leukemia (RBL-2H3) mucosal mast cells or anchored (via LynB protein) to the inner leaflet of the plasma membrane. The fluorescence lifetimes (within approximately 10%) and spectra in live cells are basically the same as in aqueous solution, which indicate the absence of both IFP aggregation and cellular environmental effects on the protein folding under our experimental conditions. However, comparative time-resolved anisotropy measurements of EGFP reveal a cytoplasmic viscosity 2.5 +/- 0.3 times larger than that of aqueous solution at room temperature, and also provide some insights into the LynB-EGFP structure and the heterogeneity of the cytoplasmic viscosity. Further, the oligomer configuration and internal depolarization of DsRed, previously observed in solution, persists upon expression in these cells. DsRed also undergoes an instantaneous three-photon induced color change under 740-nm excitation, with efficiently nonradiative green species. These results confirm the implicit assumption that in vitro fluorescence properties of IFPs are essentially valid for in vivo applications, presumably due to the beta-barrel protection of the embodied chromophore. We also discuss the relevance of LynB-EGFP anisotropy for specialized domains studies in plasma membranes.

Indexed as

AnimalsCell Line, TumorCell MembraneCells, CulturedCytoplasmDiffusionGreen Fluorescent ProteinsHydrogen-Ion ConcentrationLuminescent ProteinsMast CellsMicroscopy, ConfocalMicroscopy, FluorescenceMicroscopy, Fluorescence, MultiphotonRatsRecombinant Proteinsfluorescent protein 583Green Fluorescent ProteinsLuminescent ProteinsRecombinant Proteins

Identifiers

PMID14507719
PMCPMC1303480
OpenAlexW2067370646

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.