Evidence map›Paper›PMID 14506297›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Activation domain-mediator interactions promote transcription preinitiation complex assembly on promoter DNA.

Greg T Cantin, Jennitte L Stevens, Arnold J Berk

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 106 citations in OpenAlex.

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  17. The complex structure and function of Mediator.The Journal of biological chemistry · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Greg T CantinMolecular Biology Institute and Department of Microbiology, Immunology and Molecular Genetics, 611 Charles E. Young Drive East, University of California, Los Angeles, CA 90095, USA.
Jennitte L Stevens
Arnold J Berk
Massachusetts Institute of Technology · USUniversity of California, Los Angeles · US

Funding

UCLA NIGMS T32 Program AssessmentT32GM007185 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI TORRES, JORGE · 1985 to 2020
$21.7M
BIOSYNTHESIS OF ADENOVIRUS EARLY RNASR37CA025235 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BERK, ARNOLD J · 1987 to 2011
$7.8M
BIOSYNTHESIS OF ADENOVIRUS EARLY RNASR01CA025235 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BERK, ARNOLD J · 1985 to 2016
$2.7M
NCI NIH HHS CA 25235NCI NIH HHS R01 CA025235NCI NIH HHS R37 CA025235NIGMS NIH HHS GM 07185NIGMS NIH HHS T32 GM007185
6 · The paper itself

Abstract

The interaction of activators with mediator has been proposed to stimulate the assembly of RNA polymerase II (Pol II) preinitiation complexes, but there have been few tests of this model. The finding that the major adenovirus E1A and mitogen-activated protein kinase-phosphorylated Elk1 activation domains bind to Sur2 uniquely among the metazoan mediator subunits and the development of transcriptionally active nuclear extracts from WT and sur2-/- embryonic stem cells, reported here, allowed a direct test of the model. We found that whereas VP16, E1A, and phosphorylated Elk1 activation domains each stimulate binding of mediator, Pol II, and general transcription factors to promoter DNA in extracts from WT cells, only VP16 stimulated their binding in extracts from sur2-/- cells. This stimulation of mediator, Pol II, and general transcription factor binding to promoter DNA correlated with transcriptional activation by these activators in WT and mutant extracts. Because the mutant mediator was active in reactions with the VP16 activation domain, the lack of activity in response to the E1A and Elk1 activation domains was not due to loss of a generalized mediator function, but rather the inability of the mutant mediator to be bound by E1A and Elk1. These results directly demonstrate that the interaction of activation domains with mediator stimulates preinitiation complex assembly on promoter DNA.

Indexed as

ATP-Binding Cassette TransportersDNA-Binding ProteinsPromoter Regions, GeneticTranscription FactorsAdenovirus E1A ProteinsAnimalsBinding SitesCells, CulturedDNAets-Domain Protein Elk-1MiceMice, KnockoutMixed Function OxygenasesModels, BiologicalPotassium Channels, Inwardly RectifyingProtein Structure, TertiaryAdenovirus E1A ProteinsATP-Binding Cassette TransportersDNADNA-Binding ProteinsElk1 protein, mouseets-Domain Protein Elk-1Mixed Function OxygenasesPotassium Channels, Inwardly RectifyingProto-Oncogene ProteinsReceptors, DrugRNA Polymerase IISulfonylurea ReceptorsTrans-ActivatorsTranscription Factors

Identifiers

PMID14506297
PMCPMC218703
OpenAlexW1971911912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.