Evidence map›Paper›PMID 14506044›Full record

ArticleAntimicrobial agents and chemotherapy2003

Inhibition of aminoglycoside 6'-N-acetyltransferase type Ib-mediated amikacin resistance by antisense oligodeoxynucleotides.

Renee Sarno, Hongphuc Ha, Natalia Weinsetel, Marcelo E Tolmasky

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Bridged Nucleic Acids Reloaded.Molecules (Basel, Switzerland) · 2019
    Review
  9. Article
  10. Article
  11. Article
  12. Identification of theFrontiers in microbiology · 2018
    Article
  13. Amikacin: Uses, Resistance, and Prospects for Inhibition.Molecules (Basel, Switzerland) · 2017
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Renee SarnoDepartment of Biological Science, College of Natural Science and Mathematics, California State University Fullerton, Fullerton, California 92834-6850, USA.
Hongphuc Ha
Natalia Weinsetel
Marcelo E Tolmasky
California State University, Fullerton · US

Funding

MINORITY STUDENT DEVELOPMENT AT CSU-FULLERTONR25GM056820 · NIGMS · CALIFORNIA STATE UNIVERSITY FULLERTON · PI GOODE, CHRISTINA A · 1998 to 2005
$2.7M
DEALING WITH ANTIBIOTIC RESISTANCE--ANTISENSE TECHNOLOGYR15AI047115 · NIAID · CALIFORNIA STATE UNIVERSITY FULLERTON · PI TOLMASKY, MARCELO E · 2000 to 2022
$1.8M
NIAID NIH HHS AI47115NIAID NIH HHS R15 AI047115NIGMS NIH HHS R25 GM056820NIGMS NIH HHS R25 GM56820
6 · The paper itself

Abstract

Amikacin has been very useful in the treatment of infections caused by multiresistant bacteria because it is refractory to the actions of most modifying enzymes. However, the spread of AAC(6')-I-type acetyltransferases, enzymes capable of catalyzing inactivation of amikacin, has rendered this antibiotic all but useless in some parts of the world. The aminoglycoside 6'-N-acetyltransferase type Ib, which is coded for by the aac(6')-Ib gene, mediates resistance to amikacin and other aminoglycosides. RNase H mapping and computer prediction of the secondary structure led to the identification of five regions accessible for interaction with antisense oligodeoxynucleotides in the aac(6')-Ib mRNA. Oligodeoxynucleotides targeting these regions could bind to native mRNA with different efficiencies and mediated RNase H digestion. Selected oligodeoxynucleotides inhibited AAC(6')-Ib synthesis in cell-free coupled transcription-translation assays. After their introduction into an Escherichia coli strain harboring aac(6')-Ib by electroporation, some of these oligodeoxynucleotides decreased the level of resistance to amikacin. Our results indicate that use of antisense compounds could be a viable strategy to preserve the efficacies of existing antibiotics to which bacteria are becoming increasingly resistant.

Indexed as

AcetyltransferasesAmikacinBase SequenceBinding SitesCell-Free SystemColony Count, MicrobialDrug Resistance, Multiple, BacterialEnzyme InhibitorsEscherichia coliMolecular Sequence DataNucleic Acid ConformationOligonucleotides, AntisenseProtein BiosynthesisRibonuclease HRNA, MessengerTranscription, GeneticAcetyltransferasesAmikacinaminoglycoside N(6')-acetyltransferaseEnzyme InhibitorsOligonucleotides, AntisenseRibonuclease HRNA, Messenger

Identifiers

PMID14506044
PMCPMC201158
OpenAlexW2141483684

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.