Evidence map›Paper›PMID 14500810›Full record

ArticleNucleic acids research2003

Requirements for selective recruitment of Ets proteins and activation of mb-1/Ig-alpha gene transcription by Pax-5 (BSAP).

Holly Maier, Rachel Ostraat, Sarah Parenti, Daniel Fitzsimmons, Lawrence J Abraham, Colin W Garvie, James Hagman

Open access · bronzeAbstract read
In one paragraph

Article in Nucleic acids research, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 40 citations in OpenAlex.

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  14. Bivalent recognition of nucleosomes by the tandem PHD fingers of the CHD4 ATPase is required for CHD4-mediated repression.Proceedings of the National Academy of Sciences of the United States of America · 2012
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  19. Deletion of IKZF1 and prognosis in acute lymphoblastic leukemia.The New England journal of medicine · 2009
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Holly MaierIntegrated Department of Immunology, National Jewish Medical and Research Center and University of Colorado Health Sciences Center, Denver, CO 80262, USA.
Rachel Ostraat
Sarah Parenti
Daniel Fitzsimmons
Lawrence J Abraham
Colin W Garvie
James Hagman
University of Colorado Denver · US

Funding

THE REGULATION OF V ALPHA 7 EXPRESSING T CELLSP01AI022295 · NIAID · NATIONAL JEWISH HEALTH · PI REFAELI, YOSEF · 1985 to 2011
$11.7M
TRAINING PROGRAM IN IMMUNOLOGYT32AI007405 · NIAID · UNIVERSITY OF COLORADO DENVER · PI Laurel L Lenz, Raul Martin Torres · 1991 to 2026
$10.5M
Transcriptional Control and Lineage Commitment by Pax-5R01AI056322 · NIAID · NATIONAL JEWISH HEALTH · PI HAGMAN, JAMES R · 2003 to 2007
$1.5M
SHORT TERM CANCER RESEARCH EXPERIENCESR25CA049981 · NCI · UNIVERSITY OF COLORADO DENVER · PI BAKEMEIER, RICHARD F · 1989 to 2003
$1.0M
REGULATION OF B CELL DIFFERENTIATION IN VITROR01AI037574 · NIAID · NATIONAL JEWISH HEALTH · PI HAGMAN, JAMES R · 1997 to 2001
$547k
NCI NIH HHS 5R25-CA049981-15NCI NIH HHS R25 CA049981NIAID NIH HHS P01 AI022295NIAID NIH HHS P01 AI22295NIAID NIH HHS R01 AI056322NIAID NIH HHS R01 AI37574NIAID NIH HHS T32 AI007405NIAID NIH HHS T32 AI 07405
6 · The paper itself

Abstract

Pax-5, a member of the paired domain family of transcription factors, is a key regulator of B lymphocyte-specific transcription and differentiation. A major target of Pax-5-mediated activation is the mb-1 gene, which encodes the essential transmembrane signaling protein Ig-alpha. Pax-5 recruits three members of the Ets family of transcription factors: Ets-1, Fli-1 and GABPalpha (with GABPbeta1), to assemble ternary complexes on the mb-1 promoter in vitro. Using the Pax-5:Ets-1:DNA crystal structure as a guide, we defined amino acid requirements for transcriptional activation of endogenous mb-1 genes using a novel cell-based assay. Mutations in the beta-hairpin/beta-turn of the DNA-binding domain of Pax-5 demonstrated its importance for DNA sequence recognition and activation of mb-1 transcription. Mutations of amino acids contacting Ets-1 in the crystal structure reduced or blocked mb-1 promoter activation. One of these mutations, Q22A, resulted in greatly reduced mb-1 gene transcript levels, concurrent with the loss of its ability to recruit Fli-1 to bind the promoter in vitro. In contrast, the mutation had no effect on recruitment of the related Ets protein GABPalpha (with GABPbeta1). These data further define requirements for Pax-5 function in vivo and reveal the complexity of interactions required for cooperative partnerships between transcription factors.

Indexed as

Transcriptional ActivationAnimalsAntigens, CDCD79 AntigensCell LineDNADNA-Binding ProteinsGA-Binding Protein Transcription FactorMacromolecular SubstancesModels, MolecularMutationPAX5 Transcription FactorProtein Structure, SecondaryProto-Oncogene Protein c-ets-1Proto-Oncogene Protein c-fli-1Proto-Oncogene ProteinsAntigens, CDCD79 AntigensDNADNA-Binding ProteinsGA-Binding Protein Transcription FactorMacromolecular SubstancesPAX5 Transcription FactorProto-Oncogene Protein c-ets-1Proto-Oncogene Protein c-fli-1Proto-Oncogene ProteinsProto-Oncogene Proteins c-etsReceptors, Antigen, B-CellTrans-ActivatorsTranscription Factors

Identifiers

PMID14500810
PMCPMC206479
OpenAlexW2156240070

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.