Evidence map›Paper›PMID 1448086›Full record

ArticleMolecular and cellular biology1992

Isolation and structural analysis of a 1.2-megabase N-myc amplicon from a human neuroblastoma.

S S Schneider, J L Hiemstra, B A Zehnbauer, P Taillon-Miller, D L Le Paslier, B Vogelstein, G M Brodeur

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 55 citations in OpenAlex.

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  11. Molecular structure of double-minute chromosomes bearing amplified copies of the epidermal growth factor receptor gene in gliomas.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. MYCN is retained in single copy at chromosome 2 band p23-24 during amplification in human neuroblastoma cells.Proceedings of the National Academy of Sciences of the United States of America · 1994
    Article
  17. Article
  18. CpG island mapping of a mouse double-minute chromosome.Molecular and cellular biology · 1993
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

S S SchneiderDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri 63110.
J L Hiemstra
B A Zehnbauer
P Taillon-Miller
D L Le Paslier
B Vogelstein
G M Brodeur
Johns Hopkins University · US

Funding

MOLECULAR GENETIC ANALYSIS OF COLORECTAL CANCERR37CA043460 · NCI · JOHNS HOPKINS UNIVERSITY · PI VOGELSTEIN, BERT · 1997 to 2016
$7.4M
MOLECULAR GENETIC ANALYSIS OF NEUROBLASTOMAR01CA039771 · NCI · WASHINGTON UNIVERSITY · PI BRODEUR, GARRETT M · 1985 to 2013
$4.2M
MOLECULAR GENETIC ANALYSIS OF HUMAN NEUROBLASTOMAK04CA001027 · NCI · WASHINGTON UNIVERSITY · PI BRODEUR, GARRETT M · 1985 to 1989
–
THE P53 GENE IN HUMAN NEOPLASIAR01CA043460 · NCI · JOHNS HOPKINS UNIVERSITY · PI VOGELSTEIN, BERT · 1986 to 1995
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NCI NIH HHS CA-01027NCI NIH HHS CA-39771NCI NIH HHS CA-43460
6 · The paper itself

Abstract

Oncogene amplification is observed frequently in human cancers, but little is known about the mechanism of gene amplification or the structure of amplified DNA in tumor cells. We have studied the N-myc amplified domain from a representative neuroblastoma cell line, SMS-KAN, and compared the map of the amplicon in this cell line with that seen in normal DNA. The SMS-KAN cell line DNA was cloned into yeast artificial chromosomes (YACs), and clones were identified by screening the YAC library with amplified DNA probes that were obtained previously (B. Zehnbauer, D. Small, G. M. Brodeur, R. Seeger, and B. Vogelstein, Mol. Cell. Biol. 8:522-530, 1988). In addition, YAC clones corresponding to the normal N-myc locus on chromosome 2 were obtained by screening two normal human YAC libraries with these probes, and the restriction maps of the two sets of overlapping YACs were compared. Our results suggest that the amplified domain in this cell line is a approximately 1.2-Mb circular molecule with a head-to-tail configuration, and the physical map of the normal N-myc locus generally is conserved in the amplicon. These results provide a physical map of the amplified domain of a neuroblastoma cell line that has de novo amplification of an oncogene. The head-to-tail organization, the general conservation of the normal physical map in the amplicon, and the extrachromosomal location of the amplified DNA are most consistent with the episome formation-plus-segregation mechanism of gene amplification in these tumors.

Indexed as

Gene AmplificationGenes, mycBase SequenceChromosomes, FungalCloning, MolecularDNA, NeoplasmGenome, HumanHumansMolecular Sequence DataNeuroblastomaPolymerase Chain ReactionRestriction MappingDNA, Neoplasm

Identifiers

PMID1448086
PMCPMC360495
OpenAlexW2274092656

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.