Evidence map›Paper›PMID 1420920›Full record

ArticleBiophysical journal1992

Studies on the structure of actin gels using time correlation spectroscopy of fluorescent beads.

H Qian, E L Elson, C Frieden

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  4. Dynamics of the CapG actin-binding protein in the cell nucleus studied by FRAP and FCS.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2008
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

H QianDepartment of Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, Missouri 63110.
E L Elson
C Frieden
Washington University in St. Louis · US

Funding

METABOLIC REGULATION AND INTERACTING ENZYME SYSTEMSR01DK013332 · NIDDK · WASHINGTON UNIVERSITY · PI FRIEDEN, CARL · 1986 to 2008
$4.2M
BIOPHYSICAL STUDIES OF CYTOSKELETAL FUNCTIONR01GM038838 · NIGMS · WASHINGTON UNIVERSITY · PI ELSON, ELLIOT L. · 1987 to 2001
$571k
METABOLIC REGULATION AND INTERACTING ENZYME SYSTEMSR37DK013332 · NIDDK · WASHINGTON UNIVERSITY · PI FRIEDEN, CARL · 1987 to 1994
–
NIDDK NIH HHS DK-13332NIGMS NIH HHS GM-38838
6 · The paper itself

Abstract

Fluorescence correlation spectroscopy (FCS) has been used to measure the diffusion of fluorescently labeled beads in solutions of polymerized actin or buffer. The results, obtained at actin concentrations of 1 mg/ml, show that small beads (0.09 micron in diameter) diffuse nearly as rapidly in the actin gel as in buffer, whereas the largest beads tested (0.5 micron in diameter) are immobilized. Measured autocorrelation times for motions of beads with intermediate sizes show that the diffusion is retarded (relative to buffer) and that the time behavior cannot be represented as a single diffusive process. In addition to the retarded diffusion observed over distances > 1 micron, 0.23-micron beads also show a faster motion over smaller distances. Based on the measured rate of this faster motion, we estimate that the beads may be constrained within a cage approximately 0.67 micron on a side, equal to a filament length of approximately 250 subunits. Fluorescence correlation spectroscopy measurements made in the same small spot (radius of 1.4 microns) of the gel vary over time. From the variations of both the autocorrelation functions and the mean fluorescence, we conclude that, corresponding to a spatial scale of 1.4 microns, the actin gel is a dynamic structure with slow rearrangement of the gel occurring over periods of 20-50 s at 21-22 degrees C. This rearrangement may result from local reorganization of the actin matrix. Data for the retardation of beads by the actin gel are consistent with a detailed theory of the diffusion of particles through solutions of rigid rods that have longitudinal diffusion coefficients much less than that of the particles (Ogston, A. G., B. N. Preston, and J. D. Wells. 1973. Proc. R. Soc. Lond. A. 333:297-316).

Indexed as

ActinsGelsKineticsMacromolecular SubstancesMagnesiumProtein ConformationSpectrometry, FluorescenceTime FactorsActinsGelsMacromolecular SubstancesMagnesium

Identifiers

PMID1420920
PMCPMC1262238
OpenAlexW2075954376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.