Evidence map›Paper›PMID 1404416›Full record

ArticleJournal of molecular evolution1992

Rapid evolution of the plastid translational apparatus in a nonphotosynthetic plant: loss or accelerated sequence evolution of tRNA and ribosomal protein genes.

K H Wolfe, C W Morden, S C Ems, J D Palmer

Abstract read
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In one paragraph

Article in Journal of molecular evolution, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 149 citations in OpenAlex.

  1. Article
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  11. Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2020
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  12. Article
  13. Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2019
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  14. Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
  15. Characterization of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2019
    Article
  16. Article
  17. Article
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  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

K H WolfeDepartment of Biology, Indiana University, Bloomington 47405.
C W Morden
S C Ems
J D Palmer
Indiana University Bloomington · US

Funding

TRANSFER OF ORGANELLE GENES TO THE NUCLEUSR01GM035087 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PALMER, JEFFREY D · 1985 to 2004
$1.8M
NIGMS NIH HHS GM 35087
6 · The paper itself

Abstract

The vestigial plastid genome of Epifagus virginiana (beechdrops), a nonphotosynthetic parasitic flowering plant, is functional but lacks six ribosomal protein and 13 tRNA genes found in the chloroplast DNAs of photosynthetic flowering plants. Import of nuclear gene products is hypothesized to compensate for many of these losses. Codon usage and amino acid usage patterns in Epifagus plastic genes have not been affected by the tRNA gene losses, though a small shift in the base composition of the whole genome (toward A+T-richness) is apparent. The ribosomal protein and tRNA genes that remain have had a high rate of molecular evolution, perhaps due to relaxation of constraints on the translational apparatus. Despite the compactness and extensive gene loss, one translational gene (infA, encoding initiation factor 1) that is a pseudogene in tobacco has been maintained intact in Epifagus.

Indexed as

ChloroplastsGenes, PlantAmino Acid SequenceBase SequenceBiological EvolutionCodonGenomeMolecular Sequence DataNucleic Acid ConformationPlant ProteinsProtein BiosynthesisPseudogenesRibosomal ProteinsRNA, TransferCodonPlant ProteinsRibosomal ProteinsRNA, Transfer

Identifiers

PMID1404416
OpenAlexW2051310471

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.