Evidence map›Paper›PMID 1396552›Full record

ArticleThe EMBO journal1992

Primary and secondary structure of the pore-forming peptide of pathogenic Entamoeba histolytica.

M Leippe, E Tannich, R Nickel, G van der Goot, F Pattus, R D Horstmann, H J Müller-Eberhard

Abstract readComparative Study
In one paragraph

Article in The EMBO journal, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
  3. Intestinal invasion by Entamoeba histolytica.Sub-cellular biochemistry · 2008
    Article
  4. Article
  5. Article
  6. Laboratory diagnosis of amebiasis.Clinical microbiology reviews · 2003
    Review
  7. Article
  8. Bacteriocin AS-48, a microbial cyclic polypeptide structurally and functionally related to mammalian NK-lysin.Proceedings of the National Academy of Sciences of the United States of America · 2000
    Article
  9. Review
  10. Article
  11. Article
  12. Saposins and their interaction with lipids.Neurochemical research · 1999
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

M LeippeDepartment of Molecular Biology, Bernhard Nocht Institute for Tropical Medicine, Hamburg, Germany.
E Tannich
R Nickel
G van der Goot
F Pattus
R D Horstmann
H J Müller-Eberhard

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A pore-forming peptide is implicated in the potent cytolytic activity of pathogenic Entamoeba histolytica. Using NH2-terminal sequence information of this peptide, the corresponding cDNA was isolated. The cDNA-deduced amino acid sequence revealed a putative signal peptide and a mature peptide of 77 amino acids including six cysteine residues. Computer-aided secondary structure analysis predicted that the peptide would be composed of four adjacent alpha-helices, and CD spectroscopy indicated an all alpha-helical conformation. The tertiary structure appears to be stabilized by three disulfide bonds; the pore-forming activity was not sensitive to heat but was lost in the presence of reducing agents. Sequence homology was found to the saposins and to surfactant-associated protein B, both mammalian polypeptides of similar size and secondary structure but of non-lytic function. In particular, the six cysteine residues were found to be conserved, suggesting a common motif for stabilizing a favourable tertiary structure. Compared with previously characterized toxic peptides also containing three disulfide bonds, the amoeba peptide may represent a distinct class of biologically active peptides.

Indexed as

Ion ChannelsProtein Structure, SecondaryAmino Acid SequenceAnimalsBase SequenceBlotting, NorthernBlotting, SouthernCircular DichroismDNA, ProtozoanEntamoeba histolyticaGene LibraryMembrane ProteinsMolecular Sequence DataPolymerase Chain ReactionProtein ConformationProtozoan Proteinsamoebapore proteins, protozoanDNA, ProtozoanIon ChannelsMembrane ProteinsProtozoan ProteinsRecombinant ProteinsRNA, Protozoan

Identifiers

PMID1396552
PMCPMC556807

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.