Evidence map›Paper›PMID 1383942›Full record

ArticleNucleic acids research1992

Insertion of non-intron sequence into maize introns interferes with splicing.

K R Luehrsen, V Walbot

Abstract read
In one paragraph

Article in Nucleic acids research, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. The maize brown midrib4 (bm4) gene encodes a functional folylpolyglutamate synthase.The Plant journal : for cell and molecular biology · 2015
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

K R LuehrsenDepartment of Biological Sciences, Stanford University, CA 94305.
V Walbot

Funding

GENE ISOLATION AND TRANSFORMATION OF MAIZER01GM032422 · NIGMS · STANFORD UNIVERSITY · PI WALBOT, VIRGINIA E · 1985 to 1994
–
NIGMS NIH HHS GM 32422
6 · The paper itself

Abstract

Transposable element (TE) insertion into or near plant introns can cause intron skipping and alternative splicing events, resulting in reduced expression. To explore the impact of inserted sequences on splicing, we added non-intron sequence to two maize introns and tested these chimeric introns in a maize transient expression assay. Non-intron sequence inserted into Adh1-S intron 1 and actin intron 3 decreased expression from the luciferase reporter gene; the insertion sites tested were not in intron regions thought to be essential for splicing. Alternatively spliced mRNAs were not observed in transcripts derived from the insertion variants. In contrast, addition of an internal segment of an intron to Adh1-S intron 1 resulted in normal splice site selection and efficient processing. Because the normal intron sequence (including the conserved splice junctions) was retained in all constructs, we hypothesize that added non-intron sequence can interfere with intron recognition and/or splicing.

Indexed as

IntronsMutagenesis, InsertionalRNA SplicingActinsAlcohol DehydrogenaseBase SequenceBlotting, NorthernLuciferasesPlasmidsRestriction MappingRNARNA ProbesZea maysActinsAlcohol DehydrogenaseLuciferasesRNARNA Probes

Identifiers

PMID1383942
PMCPMC334303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.