Evidence map›Paper›PMID 1378530›Full record

ArticleMolecular and cellular biology1992

Novel DNA-binding proteins regulate intestine-specific transcription of the sucrase-isomaltase gene.

P G Traber, G D Wu, W Wang

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. CDX2 is an amplified lineage-survival oncogene in colorectal cancer.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  5. Biology of Barrett's esophagus and esophageal adenocarcinoma.Gastrointestinal endoscopy clinics of North America · 2011
    Review
  6. Article
  7. Article
  8. Cdx genes, inflammation, and the pathogenesis of intestinal metaplasia.Progress in molecular biology and translational science · 2010
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Control of gene expression in intestinal epithelial cells.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 1998
    Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P G TraberDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor.
G D Wu
W Wang
United States Department of Veterans Affairs · US

Funding

INTESTINAL AND COLONIC CYTOCHROME P450 GENE EXPRESSIONR29DK041393 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI TRABER, PETER G · 1989 to 1993
–
NIDDK NIH HHS DK41393
6 · The paper itself

Abstract

Sucrase-isomaltase (SI) is an enterocyte-specific gene which exhibits a complex pattern of expression during intestinal development and in the adult intestinal mucosa. In the studies described in this report, we demonstrate that enterocyte-specific transcription of the SI gene is regulated by an evolutionarily conserved promoter that extends approximately 180 bp upstream of the transcription start site. DNase I footprint analysis allowed the identification of three nuclear protein-binding sites within the SI promoter (SIF1, SIF2, and SIF3 [SI footprint]), each of which acted as a positive regulatory element for transcription in intestinal cell lines. SIF1 was shown to bind nuclear protein complexes present in primary mouse small intestinal cell and in an intestinal cell line (Caco-2). However, SIF1-binding proteins were absent in a variety of other epithelial and nonepithelial cells. In vitro mutagenesis experiments demonstrated that the SIF1 site is required for high-level promoter activity in intestinal cells. The SIF3 element formed prominent binding complexes with intestinal and liver nuclear extracts, whereas nuclear proteins from other epithelial and nonepithelial cells formed weaker complexes of different mobilities. The SIF2 element bound nuclear proteins in a pattern similar to that of SIF3, and cross-competition studies suggested that SIF2 and SIF3 may bind the same nuclear proteins. Taken together, these data have allowed the identification of novel DNA-binding proteins that play an important role in regulating intestine-specific transcription of the SI gene.

Indexed as

Transcription, GeneticAnimalsBase SequenceCell LineCloning, MolecularDeoxyribonuclease IDNADNA-Binding ProteinsExonsGenomic LibraryHeLa CellsHumansIntestinal MucosaLuciferasesMiceMolecular Sequence DataDeoxyribonuclease IDNADNA-Binding ProteinsLuciferasesOligodeoxyribonucleotidesRNASucrase-Isomaltase Complex

Identifiers

PMID1378530
PMCPMC364628
OpenAlexW2163542856

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.