Evidence map›Paper›PMID 1373895›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1992

Mutation in the primer binding site of the type 1 human immunodeficiency virus genome affects virus production and infectivity.

T Nagashunmugam, A Velpandi, C S Goldsmith, S R Zaki, V S Kalyanaraman, A Srinivasan

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

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  3. HIV-1 Gag shares a signature motif with annexin (Anx7), which is required for virus replication.Proceedings of the National Academy of Sciences of the United States of America · 1999
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

T NagashunmugamWistar Institute of Anatomy and Biology, Philadelphia, PA 19104.
A Velpandi
C S Goldsmith
S R Zaki
V S Kalyanaraman
A Srinivasan
The Wistar Institute · US

Funding

ROLE OF HIV IN AIDS AND AIDS-ASSOCIATED NEOPLASMSP01AI025380 · NIAID · WISTAR INSTITUTE · PI REDDY, E PREMKUMAR · 1987 to 1991
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FUNCTIONAL STUDIES WITH HYBRID HIVSR01AI029306 · NIAID · WISTAR INSTITUTE · PI SRINIVASAN, ALAGARSAMY · 1990 to 1999
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NIAID NIH HHS AI25380NIAID NIH HHS AI29306
6 · The paper itself

Abstract

In an effort to understand the contribution of the primer-binding site (PBS) region to human immunodeficiency virus (HIV) replication, we have constructed a mutant HIV proviral DNA with an alteration in the 5' end of the PBS. The PBS mutant proviral DNA was characterized by transfection of the viral DNA into CD4+ and non-CD4+ target cells. The results indicate that mutation in the PBS reduced the level of viral particles released into the medium of transfected cells in comparison to wild-type proviral DNA. The viral particles were noninfectious upon transmission to established CD4+ cell lines and phytohemagglutinin-stimulated peripheral blood lymphocytes. Electron microscopic analysis of the transfected cells revealed no abnormalities in the structure of the virion directed by the mutant proviral DNA. Also, the protein and RNA contents of the mutant virions were similar to the wild type. The quantitation of intracellular viral structural protein in the transfected cells, however, indicated that the PBS mutation may have an effect on the assembly of viral particles in addition to completely abolishing reverse transcription of viral RNA into DNA. These results provide evidence that the PBS region of the viral genome has multiple functions in HIV-1 replication.

Indexed as

Virus ReplicationBase SequenceBinding SitesDNA, ViralHIV-1HIV Core Protein p24HIV Reverse TranscriptaseMolecular Sequence DataMorphogenesisMutagenesis, InsertionalRegulatory Sequences, Nucleic AcidRNA-Directed DNA PolymeraseRNA, ViralVirionDNA, ViralHIV Core Protein p24HIV Reverse TranscriptaseRNA-Directed DNA PolymeraseRNA, Viral

Identifiers

PMID1373895
PMCPMC525643
OpenAlexW2094811396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.