Evidence map›Paper›PMID 13680319›Full record

ArticleMycorrhiza2004

Expression profiling of up-regulated plant and fungal genes in early and late stages of Medicago truncatula-Glomus mosseae interactions.

L Brechenmacher, S Weidmann, D van Tuinen, O Chatagnier, S Gianinazzi, P Franken, V Gianinazzi-Pearson

Abstract read
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Article in Mycorrhiza, 2004. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 106 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

L BrechenmacherUMR 1088 INRA/Université de Bourgogne/CNRS 2625 Plante-Microbe-Environnement, INRA/CMSE, BP 86510, 21065, Dijon Cedex, France.
S Weidmann
D van Tuinen
O Chatagnier
S Gianinazzi
P Franken
V Gianinazzi-Pearson
Institut National de la Recherche Agronomique · MACentre de Microbiologie du Sol et de l'Environnement · FRCentre National de la Recherche Scientifique · FRInstitut Agro Dijon · FRPhilipps University of Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suppression subtractive hybridization (SSH), expression profiling and EST sequencing identified 12 plant genes and six fungal genes that are expressed in the arbuscular mycorrhizal symbiosis between Medicago truncatula and Glomus mosseae. All the plant genes and three of the fungal genes were up-regulated in symbiotic tissues. Expression of 15 of the genes is described for the first time in mycorrhizal roots and two are novel sequences. Six M. truncatula genes were also activated during appressorium formation at the root surface, suggesting a role in this early stage of mycorrhiza establishment, whilst the other six plant genes were only induced in the late stages of mycorrhization and could be involved in the development or functioning of the symbiosis. Phosphate fertilization had no significant influence on expression of any of the plant genes. Expression profiling of G. mosseae genes indicated that two of them may be associated with appressorium development on roots and one with arbuscule formation or function. The other three fungal genes were expressed throughout the life-cycle of G. mosseae.

Indexed as

DNA, ComplementaryFungiGene Expression ProfilingGene Expression Regulation, FungalGene Expression Regulation, PlantGenes, FungalGenes, PlantMedicagoMolecular Sequence DataMycorrhizaeNucleic Acid HybridizationPlant RootsPolymerase Chain ReactionSymbiosisUp-RegulationDNA, Complementary

Identifiers

PMID13680319
OpenAlexW2017593405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.