Evidence map›Paper›PMID 1356765›Full record

ArticleThe EMBO journal1992

Differential DNA sequence recognition is a determinant of specificity in homeotic gene action.

S C Ekker, D P von Kessler, P A Beachy

Open access · greenAbstract readComparative Study
In one paragraph

Article in The EMBO journal, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
12.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 146 citations in OpenAlex.

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  9. Hox transcription factors influence motoneuron identity through the integrated actions of both homeodomain and non-homeodomain regions.Developmental dynamics : an official publication of the American Association of Anatomists · 2012
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  16. Sequence-specific DNA binding by the vnd/NK-2 homeodomain of Drosophila.Proceedings of the National Academy of Sciences of the United States of America · 2002
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

S C EkkerHoward Hughes Medical Institute, Department of Molecular Biology and Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205.
D P von Kessler
P A Beachy
Howard Hughes Medical Institute · USJohns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The homeotic genes of Drosophila encode transcriptional regulatory proteins that specify distinct segment identities. Previous studies have implicated the homeodomain as a major determinant of biological specificity within these proteins, but have not established the physical basis of this specificity. We show here that the homeodomains encoded by the Ultrabithorax and Deformed homeotic genes bind optimally to distinct DNA sequences and have mapped the determinants responsible for differential recognition. We further show that relative transactivation by these two proteins in a simple in vivo system can differ by nearly two orders of magnitude. Such differences in DNA sequence recognition and target activation provide a biochemical basis for at least part of the biological specificity of homeotic gene action.

Indexed as

Drosophila ProteinsGenes, HomeoboxHomeodomain ProteinsTranscription, GeneticAmino Acid SequenceAnimalsBase Sequencebeta-GalactosidaseBinding SitesDNADNA-Binding ProteinsDrosophilaKineticsMolecular Sequence DataOligodeoxyribonucleotidesProtein Conformationbeta-GalactosidaseDNADNA-Binding ProteinsDrosophila ProteinsHomeodomain ProteinsOligodeoxyribonucleotidesRecombinant Fusion ProteinsTranscription FactorsUbx protein, Drosophila

Identifiers

PMID1356765
PMCPMC556916
OpenAlexW2212606280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.