Evidence map›Paper›PMID 1350092›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1992

Organization and evolution of the human epidermal keratinocyte transglutaminase I gene.

R R Polakowska, T Eickbush, V Falciano, F Razvi, L A Goldsmith

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Transglutaminase 2: a molecular Swiss army knife.Biochimica et biophysica acta · 2012
    Review
  3. Article
  4. Framework for a protein ontology.BMC bioinformatics · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

R R PolakowskaDepartment of Dermatology, University of Rochester, NY 14642.
T Eickbush
V Falciano
F Razvi
L A Goldsmith
University of Rochester · US

Funding

STRUCTURAL PROTEINS IN GENETIC DEFECTS OF EPIDERMISR01AR030126 · NIAMS · UNIVERSITY OF ROCHESTER · PI GOLDSMITH, LOWELL ALAN · 1987 to 1989
–
MONOCLONAL ANTIBODIES TO HUMAN EPIDERMISR01AR030965 · NIAMS · UNIVERSITY OF ROCHESTER · PI GOLDSMITH, LOWELL ALAN · 1986 to 1994
–
EPIDERMAL TRANS-ACTING FACTORS IN SKIN DEVELOPMENTR29AR039724 · NIAMS · UNIVERSITY OF ROCHESTER · PI POLAKOWSKA, RENATA R · 1989 to 1993
–
NIAMS NIH HHS 5R01AR30126-08NIAMS NIH HHS 5R01AR30965-11NIAMS NIH HHS 5R29AR39724-04
6 · The paper itself

Abstract

Transglutaminases (TGases; protein-glutamine:amine gamma-glutamyltransferase, EC 2.3.2.13) are calcium-dependent crosslinking enzymes that modify proteins posttranslationally. Several distinct types of TGases have been identified, which appear to be encoded by a family of closely related genes. We isolated the gene encoding human keratinocyte-specific type I TGase (TGase I) and characterized its chromosomal organization. The TGase I gene consists of 15 exons separated by 14 introns and exhibits a restriction fragment length polymorphism. Exons appear to encode functional and/or structural domains: exon I and part of exon XV encode untranslated regions, whereas exons VII and XI contain the active site and a presumptive calcium-binding domain, respectively. Interestingly, exon VI of TGase I contains a consensus Arg-Gly-Asp tripeptide sequence whose presence suggests an intriguing extracellular function for the enzyme. We present a likely phylogenetic tree for seven known members of the TGase family based on amino acid sequence similarity. Arguments presented suggest that the active enzyme evolved first and the structural human erythrocyte membrane protein 4.2 (band 4.2) has undergone a rapid change in amino acid sequence. It follows that band 4.2 evolved from the type II TGases, whereas factor XIII subunit a evolved from the type I group.

Indexed as

Biological EvolutionAmino Acid SequenceAnimalsBase SequenceBlotting, SouthernDNAExonsHumansIsoenzymesKeratinocytesMolecular Sequence DataPhylogenyPromoter Regions, GeneticRestriction MappingRNA SplicingSequence Homology, Nucleic AcidDNAIsoenzymesTransglutaminases

Identifiers

PMID1350092
PMCPMC49105
OpenAlexW2052308483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.