ArticleMolecular & general genetics : MGG1992
Characterization and genetic mapping of a short, highly repeated, interspersed DNA sequence from rice (Oryza sativa L.).
Article in Molecular & general genetics : MGG, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
18 citing papers in PubMed.
- A review of microsatellite markers and their applications in rice breeding programs to improve blast disease resistance.International journal of molecular sciences · 2013Review
- Microsatellite analysis of genetic diversity and population genetic structure of a wild rice (Oryza rufipogon Griff.) in China.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2003Article
- Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies.BMC evolutionary biology · 2001Article
- Computational and experimental characterization of physically clustered simple sequence repeats in plants.Genetics · 2000Article
- Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize.Proceedings of the National Academy of Sciences of the United States of America · 2000Article
- Microsatellite marker development, mapping and applications in rice genetics and breeding.Plant molecular biology · 1997Review
- Microsatellite DNA markers for rice chromosomes.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996Article
- A new family of dispersed repeats from Brassica nigra: characterization and localization.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1996Article
- Characterization and genetic mapping of simple repeat sequences in the tomato genome.Molecular & general genetics : MGG · 1996Article
- Detection of section-specific random amplified polymorphic DNA (RAPD) markers in Lilium.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1995Article
- Characterization and analysis of simple sequence repeat (SSR) loci in seashore paspalum (Paspalum vaginatum Swartz).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1995Article
- A chromosome 5-specific repetitive DNA sequence in rice (Oryza sativa L).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1995Article
- Barley microsatellites: allele variation and mapping.Plant molecular biology · 1995Article
- Sequence-tagged sites (STSs) as standard landmarkers in the rice genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1994Article
- Survey of plant short tandem DNA repeats.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 1994Article
- Abundance, polymorphism and genetic mapping of microsatellites in rice.Molecular & general genetics : MGG · 1993Article
- Phylogenetic distribution and genetic mapping of a (GGC)n microsatellite from rice (Oryza sativa L.).Plant molecular biology · 1993Article
- Tourist: a large family of small inverted repeat elements frequently associated with maize genes.The Plant cell · 1992Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
2 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
A short, highly repeated, interspersed DNA sequence from rice was characterized using a combination of techniques and genetically mapped to rice chromosomes by restriction fragment length polymorphism (RFLP) analysis. A consensus sequence (GGC)n, where n varies from 13-16, for the repeated sequence family was deduced from sequence analysis. Southern blot analysis, restriction mapping of repeat element-containing genomic clones, and DNA sequence analysis indicated that the repeated sequence is interspersed in the rice genome, and is heterogeneous and divergent. About 200,000 copies are present in the rice genome. Single copy sequences flanking the repeat element were used as RFLP markers to map individual repeat elements. Eleven such repeat elements were mapped to seven different chromosomes. The strategy for characterization of highly dispersed repeated DNA and its uses in genetic mapping, DNA fingerprinting, and evolutionary studies are discussed.
Indexed as
Identifiers
1347144What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.