Evidence map›Paper›PMID 1334463›Full record

ArticleThe EMBO journal1992

Characterization of a preferred site on human chromosome 19q for integration of adeno-associated virus DNA by non-homologous recombination.

R M Kotin, R M Linden, K I Berns

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 233 papers.

0numbers the graph read from it
0cells of the map it votes in
233citing papers in PubMed
7.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

233 citing papers in PubMed, 504 citations in OpenAlex.

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  10. The deLIVERed promises of gene therapy: Past, present, and future of liver-directed gene therapy.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  11. Article
  12. Turning "trashed" genomic loci into treasurable sites for integrating chimeric antigen receptors in T and NK cells.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Review
  13. Article
  14. Article
  15. THERAPIES FOR NEONATAL DISEASES OF THE SURFACTANT SYSTEM.Transactions of the American Clinical and Climatological Association · 2025
    Review
  16. Article
  17. Article
  18. Bioengineering & translational medicine · 2024
    Article
  19. Review
  20. Article

173 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R M KotinMolecular Hematology Branch, National Institutes of Health, Bethesda, MD 20892.
R M Linden
K I Berns
National Institutes of Health · US

Funding

MOLECULAR BIOLOGY OF ADENO-ASSOCIATED VIRUSR01AI022251 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI BERNS, KENNETH IRA · 1985 to 1988
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MOLECULAR BIOLOGY OF ADENO-ASSOCIATED VIRUSR37AI022251 · NIAID · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI BERNS, KENNETH IRA · 1989 to 1998
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NIAID NIH HHS AI 22251
6 · The paper itself

Abstract

The human parvovirus, adeno-associated virus (AAV), has been shown to integrate preferentially into human chromosome 19 q13.3-qter. The human target sequence for AAV integration (AAVS1) was cloned and sequenced. By analysis of the proviral junctions it was determined that integration of the AAV DNA occurred via a non-homologous recombination pathway although there were either four or five identical nucleotides at the junctions. Integration was a multistep, concerted process that resulted in cellular sequence rearrangements. The sequence of the integration locus was analyzed for possible recombination signals. Direct repeats at a much greater than random occurrence were found distributed non-uniformly throughout the AAVS1 sequence. A CpG island containing transcription factor binding site elements is suggestive of a TATA-less promoter. Evidence for transcriptional activity was provided by PCR amplification of reverse transcribed RNA.

Indexed as

Chromosomes, Human, Pair 19Recombination, GeneticVirus IntegrationBase SequenceCloning, MolecularDependovirusDNADNA, ViralHumansMolecular Sequence DataNucleic Acid ConformationPolymerase Chain ReactionPromoter Regions, GeneticTATA BoxTranscription, GeneticDNADNA, Viral

Identifiers

PMID1334463
PMCPMC556985
OpenAlexW170859630

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.