Evidence map›Paper›PMID 1328681›Full record

ArticleJournal of virology1992

a1/EBP: a leucine zipper protein that binds CCAAT/enhancer elements in the avian leukosis virus long terminal repeat enhancer.

W J Bowers, A Ruddell

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of virology, 1992. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Genomic diversity of theJournal of veterinary science · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

W J BowersDepartment of Microbiology and Immunology, University of Rochester Medical Center, New York 14642.
A Ruddell
University of Rochester Medical Center · US

Funding

Training in Microbial PathogenesisT32AI007362 · NIAID · UNIVERSITY OF ROCHESTER · PI IGLEWSKI, BARBARA H. · 1990 to 2010
$2.6M
C-MYC PROTO-ONCOGENE TRANSCRIPTIONAL ELONGATION BLOCKR01CA054337 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 1991 to 2000
$550k
REGULATION OF ALV EXPRESSION AND PATHOGENESISR01CA054768 · NCI · UNIVERSITY OF ROCHESTER · PI RUDDELL, M ALANNA · 1992 to 1995
–
NCI NIH HHS CA54337NCI NIH HHS CA54768NIAID NIH HHS AI07362
6 · The paper itself

Abstract

Avian leukosis virus (ALV) induces bursal lymphoma in chickens after integration of proviral long terminal repeat (LTR) enhancer sequences next to the c-myc proto-oncogene. Labile LTR-binding proteins appear to be essential for c-myc hyperexpression, since both LTR-enhanced transcription and the activities of LTR-binding proteins are specifically decreased after inhibition of protein synthesis (A. Ruddell, M. Linial, W. Schubach, and M. Groudine, J. Virol. 62:2728-2735, 1988). This lability is restricted to hematopoietic cells from ALV-susceptible chicken strains, suggesting that the labile proteins play an important role in lymphomagenesis. The major labile activity binding to the a1 LTR region (A. Ruddell, M. Linial, and M. Groudine, Mol. Cell. Biol. 12:5660-5668, 1989) was purified from bursal lymphoma cells by conventional and oligonucleotide affinity chromatography, yielding three proteins of 35, 40, and 42 kDa. More than one of these species binds the a1 LTR region, as judged by gel shift analysis. A gene encoding an a1-binding protein (designated a1/EBP) was cloned by screening a bursal lymphoma cDNA library for fusion proteins binding the a1 LTR site. DNase I footprinting and gel shift assays indicate that the a1/EBP fusion protein binds multiple LTR CCAAT/enhancer elements in a pattern similar to that of the purified B-cell protein. DNA sequence analysis shows that this 2.2-kb cDNA encodes a 209-amino-acid open reading frame containing carboxy-terminal basic and leucine zipper motifs, indicating that a1/EBP encodes a novel member of the leucine zipper family of transcription factors.

Indexed as

Avian ProteinsCCAAT-Enhancer-Binding ProteinsLeucine ZippersAmino Acid SequenceAnimalsAvian Leukosis VirusBase SequenceBursa of FabriciusCloning, MolecularDNA, Single-StrandedEnhancer Elements, GeneticGenesLymphomaMolecular Sequence DataOpen Reading FramesRepetitive Sequences, Nucleic AcidAvian ProteinsCCAAT-Enhancer-Binding ProteinsDNA, Single-StrandedTranscription Factors

Identifiers

PMID1328681
PMCPMC240153
OpenAlexW2154037819

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.