Evidence map›Paper›PMID 13129941›Full record

ArticleJournal of bacteriology2003

The DsbA signal sequence directs efficient, cotranslational export of passenger proteins to the Escherichia coli periplasm via the signal recognition particle pathway.

Clark F Schierle, Mehmet Berkmen, Damon Huber, Carol Kumamoto, Dana Boyd, Jon Beckwith

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 207 citations in OpenAlex.

  1. Article
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  4. A biosensor toolbox for monitoring recombinant protein production inFrontiers in bioengineering and biotechnology · 2026
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  6. Disulphide bond-forming enzymes in clostridial species.Microbiology (Reading, England) · 2025
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  7. Review
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  9. Review
  10. Probing Pairwise Protein-Protein Interactions with the Bacterial POLAR Assay.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  11. Control of biofilm formation by anProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Control of Biofilm Formation by anbioRxiv : the preprint server for biology · 2023
    Article
  14. Review
  15. Using the inner membrane ofEngineering in life sciences · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Clark F SchierleDepartment of Microbiology and Molecular Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Mehmet Berkmen
Damon Huber
Carol Kumamoto
Dana Boyd
Jon Beckwith
Harvard University · USTufts University · US

Funding

Microbial Diversity in Mechanisms of Disulfide Bond Formation and ReductionR01GM041883 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI BOYD, DANA · 1989 to 2014
$7.8M
Regulation of Fungal Invasive GrowthR01AI038591 · NIAID · TUFTS UNIVERSITY BOSTON · PI KUMAMOTO, CAROL A. · 1996 to 2006
$1.9M
NIAID NIH HHS AI38591NIAID NIH HHS R01 AI038591NIGMS NIH HHS GM41883NIGMS NIH HHS R01 GM041883
6 · The paper itself

Abstract

The Escherichia coli cytoplasmic protein thioredoxin 1 can be efficiently exported to the periplasmic space by the signal sequence of the DsbA protein (DsbAss) but not by the signal sequence of alkaline phosphatase (PhoA) or maltose binding protein (MBP). Using mutations of the signal recognition particle (SRP) pathway, we found that DsbAss directs thioredoxin 1 to the SRP export pathway. When DsbAss is fused to MBP, MBP also is directed to the SRP pathway. We show directly that the DsbAss-promoted export of MBP is largely cotranslational, in contrast to the mode of MBP export when the native signal sequence is utilized. However, both the export of thioredoxin 1 by DsbAss and the export of DsbA itself are quite sensitive to even the slight inhibition of SecA. These results suggest that SecA may be essential for both the slow posttranslational pathway and the SRP-dependent cotranslational pathway. Finally, probably because of its rapid folding in the cytoplasm, thioredoxin provides, along with gene fusion approaches, a sensitive assay system for signal sequences that utilize the SRP pathway.

Indexed as

Bacterial ProteinsProtein BiosynthesisProtein Sorting SignalsAdenosine TriphosphatasesAlkaline PhosphataseCarrier ProteinsEscherichia coliEscherichia coli ProteinsMaltose-Binding ProteinsMembrane Transport ProteinsPeriplasmProtein Disulfide-IsomerasesProtein TransportSecA ProteinsSEC Translocation ChannelsSignal Recognition ParticleAdenosine TriphosphatasesAlkaline PhosphataseBacterial ProteinsCarrier ProteinsEscherichia coli ProteinsMaltose-Binding ProteinsMembrane Transport ProteinsProtein Disulfide-IsomerasesProtein Sorting SignalsSecA ProteinsSEC Translocation ChannelsSignal Recognition ParticleThioredoxins

Identifiers

PMID13129941
PMCPMC193964
OpenAlexW2075376480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.