Evidence map›Paper›PMID 12975325›Full record

ArticleGenes & development2003

The budding yeast silencing protein Sir1 is a functional component of centromeric chromatin.

Judith A Sharp, Denise C Krawitz, Kelly A Gardner, Catherine A Fox, Paul D Kaufman

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. The role of SIRT3 in homeostasis and cellular health.Frontiers in cellular neuroscience · 2024
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  18. Checkpoint functions are required for normal S-phase progression in Saccharomyces cerevisiae RCAF- and CAF-I-defective mutants.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Judith A SharpLawrence Berkeley National Laboratory and Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, California 94720, USA.
Denise C Krawitz
Kelly A Gardner
Catherine A Fox
Paul D Kaufman
Lawrence Berkeley National Laboratory · US

Funding

Regulation of repetitive chromatin structures during the human cell cycleR01GM055712 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI KAUFMAN, PAUL D. · 1997 to 2014
$5.1M
NIGMS NIH HHS R01 GM055712
6 · The paper itself

Abstract

In fission yeast and multicellular organisms, centromere-proximal regions of chromosomes are heterochromatic, containing proteins that silence gene expression. In contrast, the relationship between heterochromatin proteins and kinetochore function in the budding yeast Saccharomyces cerevisiae remains largely unexplored. Here we report that the yeast heterochromatin protein Sir1 is a component of centromeric chromatin and contributes to mitotic chromosome stability. Sir1 recruitment to centromeres occurred through a novel mechanism independent of its interaction with the origin recognition complex (ORC). Sir1 function at centromeres was distinct from its role in forming heterochromatin, because the Sir2-4 proteins were not associated with centromeric regions. Sir1 bound to Cac1, a subunit of chromatin assembly factor I (CAF-I), and helped to retain Cac1 at centromeric loci. These studies reveal that although budding yeast and mammalian cells use fundamentally different mechanisms of forming heterochromatin, they both use silencing proteins to attract the histone deposition factor CAF-I to centromeric chromatin.

Indexed as

Carrier ProteinsChromosomal Proteins, Non-HistoneCalcium-Binding ProteinsCell Cycle ProteinsCentromereChromatinChromatin Assembly Factor-1Chromosome SegregationDNA-Binding ProteinsFungal ProteinsKinetochoresMad2 ProteinsNuclear ProteinsProtein SubunitsRecombinant Fusion ProteinsRepressor ProteinsCalcium-Binding ProteinsCarrier ProteinsCBF2 protein, S cerevisiaeCell Cycle ProteinsChromatinChromatin Assembly Factor-1Chromosomal Proteins, Non-HistoneDNA-Binding ProteinsFungal ProteinsHIR1 protein, S cerevisiaeMad2 ProteinsMAD2 protein, S cerevisiaeNuclear ProteinsProtein SubunitsRecombinant Fusion ProteinsRepressor ProteinsSaccharomyces cerevisiae ProteinsSilent Information Regulator Proteins, Saccharomyces cerevisiaeSIR1 protein, S cerevisiae

Identifiers

PMID12975325
PMCPMC218072
OpenAlexW2162839494

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.