Evidence map›Paper›PMID 12972597›Full record

ArticleMolecular and cellular biology2003

CpG methylation of DNA restricts prereplication complex assembly in Xenopus egg extracts.

Kevin J Harvey, John Newport

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
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  5. Review
  6. Article
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  8. Article
  9. Article
  10. Article
  11. Replication landscape of the human genome.Nature communications · 2016
    Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. How dormant origins promote complete genome replication.Trends in biochemical sciences · 2011
    Review
  17. Review
  18. Article
  19. Article
  20. Mathematical modelling of eukaryotic DNA replication.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Kevin J HarveyDivision of Biology, University of California, San Diego, La Jolla, California 92093, USA.
John Newport
University of California, San Diego · US

Funding

BIOCHEMICAL ANALYSIS OF NUCLEAR STRUCTURER37GM033523 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI MCGINNIS, WILLIAM JAMES · 2000 to 2005
$1.7M
CHARACTERIZATION OF METAZOAN ORIGINS OF REPLICATIONF32GM020633 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI HARVEY, KEVIN J · 2000 to 2001
$73k
BIOCHEMICAL ANALYSIS OF NUCLEAR STRUCTURER01GM033523 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI NEWPORT, JOHN W · 1985 to 1999
–
NIGMS NIH HHS F32 GM020633NIGMS NIH HHS F32GM20633-01NIGMS NIH HHS GM33523NIGMS NIH HHS R01 GM033523NIGMS NIH HHS R37 GM033523
6 · The paper itself

Abstract

In a Xenopus egg replication system, the origin recognition complex (ORC) does not bind to CpG methylated DNA and DNA replication is inhibited. Insertion of low density CpG DNA of at least 1.2 kb into methylated plasmids rescues both replication and ORC binding. Using this pseudo-origin, we find that ORC binding is restricted to low-CpG-density DNA; however, MCM is loaded onto both weakly and highly methylated DNA and occupies at least approximately 2 kb of DNA. Replication initiates coincident with MCM, and even the most distally bound MCM is associated with sites of replication initiation. These results suggest that in metazoans MCM is loaded onto and initiates replication over a large region distant from ORC.

Indexed as

DNA MethylationDNA ReplicationAdenosine TriphosphateAnimalsBinding SitesCell Cycle ProteinsCell NucleusChromatinCytosolDNA-Binding ProteinsNuclear ProteinsOocytesOrigin Recognition ComplexProtein BindingTime FactorsXenopusAdenosine TriphosphateCell Cycle ProteinsChromatinDNA-Binding ProteinsNuclear ProteinsOrigin Recognition Complex

Identifiers

PMID12972597
PMCPMC193934
OpenAlexW2122808742

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.