Evidence map›Paper›PMID 12972550›Full record

ArticleMolecular biology of the cell2003

Rer1p, a retrieval receptor for ER membrane proteins, recognizes transmembrane domains in multiple modes.

Ken Sato, Miyuki Sato, Akihiko Nakano

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 102 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Conventional and Unconventional Protein Secretion in Yeast and Animal Cells.Methods in molecular biology (Clifton, N.J.) · 2024
    Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Protein quality control in the secretory pathway.The Journal of cell biology · 2019
    Review
  11. Endoplasmic Reticulum Export of GPI-Anchored Proteins.International journal of molecular sciences · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Dimeric sorting code for concentrative cargo selection by the COPII coat.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  16. Article
  17. Article
  18. Protein sorting at the ER-Golgi interface.The Journal of cell biology · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ken SatoMolecular Membrane Biology Laboratory, Discovery Research Institute, Riken, Wako, Saitama 351-0198, Japan. satoken@postman.riken.go.jp
Miyuki Sato
Akihiko Nakano

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The yeast Golgi membrane protein Rer1p is required for the retrieval of various endoplasmic reticulum (ER) membrane proteins such as Sec12p and Sec71p to the ER. We demonstrate here that the transmembrane domain (TMD) of Sec71p, a type-III membrane protein, contains an ER localization signal, which is required for physical recognition by Rer1p. The Sec71TMD-GFP fusion protein is efficiently retrieved to the ER by Rer1p. The structural feature of this TMD signal turns out to be the spatial location of polar residues flanking the highly hydrophobic core sequence but not the whole length of the TMD. On the Rer1p side, Tyr152 residue in the 4th TMD is important for the recognition of Sec12p but not Sec71p, suggesting that Rer1p interacts with its ligands at least in two modes. Sec71TMD-GFP expressed in the Deltarer1 mutant cells is mislocalized from the ER to the lumen of vacuoles via the multivesicular body (MVB) sorting pathway. In this case, not only the presence of polar residues in the Sec71TMD but also the length of the TMD is critical for the MVB sorting. Thus, the Rer1p-dependent ER retrieval and the MVB sorting in late endosomes both watch polar residues in the TMD but in a different manner.

Indexed as

Amino Acid SequenceCell CompartmentationEndoplasmic ReticulumFungal ProteinsGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsLuminescent ProteinsMembrane GlycoproteinsMembrane ProteinsModels, MolecularMolecular Sequence DataMutationProtein BindingProtein Structure, TertiaryProtein TransportRecombinant ProteinsFungal ProteinsGreen Fluorescent ProteinsGuanine Nucleotide Exchange FactorsLuminescent ProteinsMembrane GlycoproteinsMembrane ProteinsRecombinant ProteinsRER1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSEC12 protein, S cerevisiaeSEC66 protein, S cerevisiaeVesicular Transport Proteins

Identifiers

PMID12972550
PMCPMC196553
OpenAlexW2127540366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.