Evidence map›Paper›PMID 12970488›Full record

ArticlePlant physiology2003

Auxin up-regulates MtSERK1 expression in both Medicago truncatula root-forming and embryogenic cultures.

Kim E Nolan, Rina R Irwanto, Ray J Rose

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
12.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 216 citations in OpenAlex.

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  12. Cloning and expression analysis ofOpen life sciences · 2022
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  13. Synthetic Strigolactone GR24 ImprovesPlants (Basel, Switzerland) · 2021
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  14. Genes, proteins and other networks regulating somatic embryogenesis in plants.Journal, genetic engineering & biotechnology · 2020
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  17. Somatic Embryogenesis in theFrontiers in plant science · 2019
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  18. Signaling Overview of Plant Somatic Embryogenesis.Frontiers in plant science · 2019
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kim E NolanUniversity of Newcastle and Australian Research Council Centre of Excellence for Integrative Legume Research, School of Environmental and Life Sciences University, Dr. Callaghan, NSW 2308, Australia.
Rina R Irwanto
Ray J Rose
Australian Research Council · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have cloned a SOMATIC EMBRYOGENESIS RECEPTOR KINASE (SERK) gene from Medicago truncatula (MtSERK1) and examined its expression in culture using real time PCR. In the presence of the auxin 1-naphthaleneacetic acid (NAA) alone, root differentiation occurs from the proliferating calli in both the cultured highly embryogenic seed line (2HA) and a low to nonembryogenic seed line (M. truncatula cv Jemalong). Auxin stimulated MtSERK1 expression in both 2HA and M. truncatula cv Jemalong. Embryo induction in proliferating calli requires a cytokinin in M. truncatula and unlike root formation is substantively induced in 2HA, not M. truncatula cv Jemalong. On embryo induction medium containing NAA and the cytokinin 6-benzylaminopurine (BAP), expression of MtSERK1 is elevated within 2 d of initiation of culture in both M. truncatula cv Jemalong and 2HA. However, MtSERK1 expression is much higher when both NAA and BAP are in the medium. BAP potentiates the NAA induction because MtSERK1 expression is not up-regulated by BAP alone. The 2HA genotype is able to increase its embryo formation because of the way it responds to cytokinin, but not because of the cytokinin effect on MtSERK1. Although the studies with M. truncatula indicate that somatic embryogenesis is associated with high SERK expression, auxin alone does not induce somatic embryogenesis as in carrot (Daucus carota) and Arabidopsis. Auxin in M. truncatula induces roots, and there is a clear up-regulation of MtSERK1. Although our analyses suggest that MtSERK1 is orthologous to AtSERK1, which in Arabidopsis is involved in somatic embryogenesis, in legumes, MtSERK1 may have a broader role in morphogenesis in cultured tissue rather than being specific to somatic embryogenesis.

Indexed as

AdenineAmino Acid SequenceBenzyl CompoundsCulture TechniquesCytokininsExpressed Sequence TagsGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantIndoleacetic AcidsKinetinMedicagoMolecular Sequence DataNaphthaleneacetic AcidsPhylogenyPlant ProteinsPlant Roots1-naphthaleneacetic acidAdeninebenzylaminopurineBenzyl CompoundsCytokininsIndoleacetic AcidsKinetinNaphthaleneacetic AcidsPlant ProteinsProtein KinasesPurines

Identifiers

PMID12970488
PMCPMC196599
OpenAlexW2111491687

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.