Evidence map›Paper›PMID 12970174›Full record

ArticleThe EMBO journal2003

Conformation of full-length Bruton tyrosine kinase (Btk) from synchrotron X-ray solution scattering.

José A Márquez, C I Edvard Smith, Maxim V Petoukhov, Paola Lo Surdo, Pekka T Mattsson, Marika Knekt, Anna Westlund, Klaus Scheffzek, Matti Saraste, Dmitri I Svergun

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 78 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Noncatalytic Bruton's tyrosine kinase activates PLCγThe Journal of biological chemistry · 2020
    Article
  10. Dynamic regulatory features of the protein tyrosine kinases.Biochemical Society transactions · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. T-cell signaling regulated by the Tec family kinase, Itk.Cold Spring Harbor perspectives in biology · 2010
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 2 countries.

José A MárquezEuropean Molecular Biology Laboratory, Grenoble Outstation, 6, rue Jules Horowitz, BP181 38042 Grenoble Cedex 9, France. marquez@embl-grenoble.fr
C I Edvard Smith
Maxim V Petoukhov
Paola Lo Surdo
Pekka T Mattsson
Marika Knekt
Anna Westlund
Klaus Scheffzek
Matti Saraste
Dmitri I Svergun
European Molecular Biology Laboratory · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Brutons's tyrosine kinase (Btk) is a non-receptor protein tyrosine kinase (nrPTK) essential for the development of B lymphocytes in humans and mice. Like Src and Abl PTKs, Btk contains a conserved cassette formed by SH3, SH2 and protein kinase domains, but differs from them by the presence of an N-terminal PH domain and the Tec homology region. The domain structure of Btk was analysed using X-ray synchrotron radiation scattering in solution. Low resolution shapes of the full-length protein and several deletion mutants determined ab initio from the scattering data indicated a linear arrangement of domains. This arrangement was further confirmed by rigid body modelling using known high resolution structures of individual domains. The final model of Btk displays an extended conformation with no, or little, inter-domain interactions. In agreement with these results, deletion of non-catalytic domains failed to enhance the activity of Btk. Taken together, our results indicate that, contrary to Src and Abl, Btk might not require an assembled conformation for the regulation of its activity.

Indexed as

Agammaglobulinaemia Tyrosine KinaseCloning, MolecularHumansModels, MolecularProtein ConformationProtein-Tyrosine KinasesRecombinant ProteinsReproducibility of ResultsSensitivity and SpecificitySolutionsSynchrotronsX-Ray DiffractionAgammaglobulinaemia Tyrosine KinaseBTK protein, humanBtk protein, mouseProtein-Tyrosine KinasesRecombinant ProteinsSolutions

Identifiers

PMID12970174
PMCPMC212716
OpenAlexW2024504837

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.