Evidence map›Paper›PMID 12958229›Full record

ArticleJournal of clinical microbiology2003

Detection of infectious human immunodeficiency virus type 1 in female genital secretions by a short-term culture method.

James E Cummins, Julie M Villanueva, Tammy Evans-Strickfaden, Shekou M Sesay, Sheila R Abner, Timothy J Bush, Timothy A Green, Jeffrey L Lennox, Thomas Wright, Thomas M Folks and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

James E CumminsDivision of AIDS, STD, and TB Laboratory Research, National Center for Infectious Diseases, National Center for HIV, STD, and TB Prevention, Centers for Disease Control and Prevention, Atlanta, Georgia 30333, USA.
Julie M Villanueva
Tammy Evans-Strickfaden
Shekou M Sesay
Sheila R Abner
Timothy J Bush
Timothy A Green
Jeffrey L Lennox
Thomas Wright
Thomas M Folks
Clyde E Hart
Charlene S Dezzutti
National Center for Infectious Diseases · USEmory University · USColumbia University · USNational Center for HIV/AIDS Viral Hepatitis STD and TB Prevention · US

Funding

VAGINAL MICROBICIDES FOR PREVENTION OF HIV TRANSMISSIONF32HD040727 · NICHD · U.S. CENTERS FOR DISEASE CONTROL &PREV · PI CUMMINS, JAMES E. · 2001 to 2003
$121k
NICHD NIH HHS 5 F32 HD40727-02NICHD NIH HHS F32 HD040727ODCDC CDC HHS U64/CCU214921ODCDC CDC HHS U64/CCU412279
6 · The paper itself

Abstract

Infectious human immunodeficiency virus type 1 (HIV-1) is difficult to detect in female genital secretions by standard virus culture techniques. To improve detection of cell-free HIV-1 in female genital secretions, we adapted a short-term assay that uses the multinuclear-activation galactosidase indicator (MAGI) assay. When vaginal lavages from HIV-1-infected women were tested with the adapted MAGI assay, 25 (64%) of 39 lavages with detectable, cell-free HIV-1 RNA were shown to have infectious virus. No infectious virus was found in 10 vaginal lavages from HIV-1-infected women with undetectable vaginal viral loads. Significantly (P < 0.01) more lavages from HIV-1-infected women tested positive for infectious virus by the MAGI assay than by standard peripheral blood mononuclear cell (PBMC) coculture, which detected infectious virus in only 6 (17%) of 35 vaginal lavages. Lavages with viral loads of >10,000 copies per lavage yielded significantly (P < 0.01) more positive cultures than those with <10,000 copies by using the MAGI assay. Detection of infectious HIV-1 in vaginal lavages was not associated with the presence of genital tract infections or CD4(+)-T-cell counts. However, although the results were not significant (P = 0.08), the MAGI assay detected infectious virus from more vaginal lavages at a vaginal pH of >/=4.5 than at a pH of <4.5. These results indicate that the MAGI assay is more sensitive than PBMC culture methods for detecting infectious virus in female genital secretions. Accurate measurements of infectious virus in genital secretions will improve studies that evaluate sexual transmission of HIV-1.

Indexed as

AdolescentAdultbeta-GalactosidaseCathepsin DCD4 Lymphocyte CountCoculture TechniquesColorimetryCytokinesFemaleGenital Diseases, FemaleHIV-1HumansHydrogen-Ion ConcentrationMiddle AgedVaginabeta-GalactosidaseCathepsin DCytokines

Identifiers

PMID12958229
PMCPMC193780
OpenAlexW2096438315

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.