Evidence map›Paper›PMID 12958215›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2003

Differential substrate-induced signaling through the TonB-dependent transporter BtuB.

Nathalie Cadieux, Phu G Phan, David S Cafiso, Robert J Kadner

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

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  14. Substrate-dependent transmembrane signaling in TonB-dependent transporters is not conserved.Proceedings of the National Academy of Sciences of the United States of America · 2007
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Nathalie CadieuxDepartment of Microbiology, University of Virginia, Charlottesville, VA 22908-0734, USA.
Phu G Phan
David S Cafiso
Robert J Kadner
UConn Health · USUniversity of Pittsburgh · US

Funding

MOLECULAR MECHANISMS OF MEMBRANE TRANSPORTR01GM035215 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DAVID S CAFISO · 1985 to 2026
$7.3M
TRANSPORT OF VITAMIN B12 IN E.COLIR01GM019078 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI NAKAMOTO, ROBERT K. · 1985 to 2007
$2.6M
INTEGRIN RECYCLING AND NEUTROPHIL MIGRATIONF32GM019078 · NIGMS · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI PIERINI, LYNDA M · 1997 to 1999
–
NIGMS NIH HHS F32 GM019078NIGMS NIH HHS GM19078NIGMS NIH HHS GM35215NIGMS NIH HHS R01 GM019078NIGMS NIH HHS R01 GM035215
6 · The paper itself

Abstract

The BtuB transporter mediates high-affinity binding and TonB-dependent active transport of vitamin B12 [cyanocobalamin (CNCbl)] across the outer membrane of Escherichia coli. A characteristic feature of TonB-dependent transporters is the Ton box, a conserved sequence near the N terminus and exposed to the periplasm. Crosslinking to TonB and site-directed spin labeling indicated that the Ton box of BtuB undergoes a substantial conformational transition in response to CNCbl binding, but only slight movement was seen in crystal structures. An in vivo method of detecting substrate-induced changes in the Ton box environment measured reaction of a biotin maleimide derivative with cysteine substitutions through the N-terminal region of BtuB between positions 1 and 31. The degree of maleimide labeling of different residues correlated with their accessibility in the crystal structure. Labeling of many positions was increased strongly when CNCbl was present, consistent with the undocking of this region proposed from spin-labeling analyses. The receptor-binding domain of colicin E3, which binds to BtuB competitively with CNCbl, resulted in decreased labeling. Both substrate-induced transitions occur in and beyond the Ton box and were affected by transport-uncoupling substitutions. Thus, two transport substrates that bind competitively to the extracellular face of BtuB stabilize opposite transitions of the Ton box.

Indexed as

Signal TransductionArabidopsis ProteinsBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coli ProteinsMembrane ProteinsMembrane Transport ProteinsMicroscopy, FluorescenceMutagenesis, Site-DirectedPhosphoprotein PhosphatasesReceptors, PeptideSubstrate SpecificityArabidopsis ProteinsBacterial Outer Membrane ProteinsBacterial ProteinsBtuB protein, E coliEscherichia coli ProteinsFASS protein, ArabidopsisMembrane ProteinsMembrane Transport ProteinsPhosphoprotein PhosphatasesReceptors, PeptidetonB protein, BacteriatonB protein, E coli

Identifiers

PMID12958215
PMCPMC196865
OpenAlexW2151319524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.