Evidence map›Paper›PMID 12952067›Full record

ArticleJournal of muscle research and cell motility2002

Amino acids 519-524 of Dictyostelium myosin II form a surface loop that aids actin binding by facilitating a conformational change.

Taro Q P Uyeda, Bruce Patterson, Leonardo Mendoza, Yuichi Hiratsuka

Abstract read
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In one paragraph

Article in Journal of muscle research and cell motility, 2002. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 99% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Taro Q P UyedaGene Function Research Laboratory, National Institute for Advanced Industrial Science and Technology, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8562, Japan. t-uyeda@aist.go.jp
Bruce Patterson
Leonardo Mendoza
Yuichi Hiratsuka
National Institute of Advanced Industrial Science and Technology · JPUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Residues 519-524 of Dictyostelium myosin II form a small surface loop on the actin binding face, and have been suggested to bind directly to actin through high affinity hydrophobic interactions. To test this hypothesis, we have characterized mutant myosins that lack this loop in vivo and in vitro. A mutant myosin in which this loop was replaced by an Ala residue (delta519-524/+A) was non-functional in vivo. Replacement with a single Gly residue instead of Ala yielded partial function, suggesting that structural flexibility, rather than hydrophobicity, is the key feature of the loop. The in vivo phenotype of the mutant enabled us to identify a number of additional amino acid changes that restore function to the delta519-524/+A mutation. Intriguingly, many of these, including L596S, were located at some distances away from the 519-524 loop. We have also isolated suppressors for the L596S mutant myosin, which was not functional in vivo. The suppressors for delta519-524/+A and those for L596S showed complementary charge patterns. In ATPase assays, delta519-524/+A S1 showed very low activity and little enhancement by actin, whereas L596S S1 was hyper active and displayed enhanced affinity for actin. In motility assays, delta519-524/+A myosin released actin filaments upon addition of ATP and was unable to support movements. L596S myosin was also inactive, but in this case actin filaments stayed immobile even after the addition of ATP. Transient kinetic measurements demonstrated that delta519-524/+A S1 is not only slower than wild type to bind actin filaments, but also slower to dissociate from actin filaments. Based on these results, we concluded that the 519-524 loop is not a major actin binding site but aids actin binding by facilitating a critical conformational change.

Indexed as

ActinsAdenosine TriphosphatasesAmino Acid SequenceAnimalsBinding SitesDictyosteliumKineticsModels, MolecularMutagenesisMyosin Type IIPlasmidsProtein ConformationRecombinant ProteinsSequence DeletionActinsAdenosine TriphosphatasesMyosin Type IIRecombinant Proteins

Identifiers

PMID12952067
OpenAlexW102875592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.