Evidence map›Paper›PMID 12923094›Full record

ArticleJournal of bacteriology2003

Identification of a differentially expressed oligopeptide binding protein (OppA2) in Streptococcus uberis by representational difference analysis of cDNA.

D L Taylor, P N Ward, C D Rapier, J A Leigh, L D Bowler

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
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  6. Application of representational difference analysis to identify genomic differences between Bradyrhizobium elkanii and B. Japonicum species.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2010
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

D L TaylorTrafford Centre for Graduate Medical Education and Research, University of Sussex, Falmer, Brighton BN1 9RY, UK. d.l.taylor@sussex.ac.uk
P N Ward
C D Rapier
J A Leigh
L D Bowler
Organic Research Centre · GBUniversity of Sussex · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Streptococcus uberis is an increasingly significant cause of intramammary infection in the dairy cow, presently responsible for approximately 33% of all cases of bovine mastitis in the United Kingdom. Following experimentally induced infection of the lactating mammary gland, S. uberis is found predominantly in the luminal areas of secretory alveoli and ductular tissue, indicating that much of the bacterial growth occurs in residual and newly synthesized milk. With the objective of identifying potential virulence determinants in a clinical isolate of S. uberis, we have used representational difference analysis of cDNA to identify genes that show modified expression in milk. We have identified a number of differentially expressed genes that may contribute to the overall pathogenicity of the organism. Of these, a transcript encoding a putative oligopeptide binding protein (OppA) was further characterized. We have found that S. uberis possesses two oppA-like open reading frames, oppA1 and oppA2, which are up-regulated to different degrees following growth in milk. Mutants lacking either oppA1 or oppA2 are viable and have an increased resistance to the toxic peptide derivative aminopterin; however, only mutants lacking oppA1 display a lower rate of growth in milk. In addition, expression of the oppA genes appears to be coordinated by different mechanisms. We conclude that the oppA genes encode oligopeptide binding proteins, possibly displaying different specificities, required for the efficient growth of S. uberis in milk.

Indexed as

Gene Expression Regulation, BacterialAmino Acid SequenceAnimalsBacterial ProteinsCarrier ProteinsCattleCattle DiseasesDNA, BacterialDNA, ComplementaryFemaleLipoproteinsMastitis, BovineMilkMolecular Sequence DataNucleic Acid HybridizationSequence AlignmentBacterial ProteinsCarrier ProteinsDNA, BacterialDNA, ComplementaryLipoproteinsoligopeptide-binding protein, bacteria

Identifiers

PMID12923094
PMCPMC181005
OpenAlexW2112305937

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.