Evidence map›Paper›PMID 12923079›Full record

ArticleJournal of bacteriology2003

Membrane localization of motility, signaling, and polyketide synthetase proteins in Myxococcus xanthus.

Vesna Simunovic, Frank C Gherardini, Lawrence J Shimkets

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Myxobacteria, polarity, and multicellular morphogenesis.Cold Spring Harbor perspectives in biology · 2010
    Review
  10. Article
  11. Article
  12. A singular enzymatic megacomplex from Bacillus subtilis.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Vesna SimunovicDepartment of Microbiology, University of Georgia, 527 Biological Sciences Building, Athens, GA 30602, USA.
Frank C Gherardini
Lawrence J Shimkets
University of Georgia · US

Funding

The Roles of Key Transcription Factors on the Pathogenesis of B. Burgdorferi, the Causative Agent of Lyme DiseaseZIAAI000905 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GHERARDINI, FRANK · 2009 to 2023
$12.4M
The Oxidative Stress Response In B. burgdorferiZ01AI000905 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI GHERARDINI, FRANK · 2002 to 2008
$744k
The Role Of Alternate Sigma Factors In The Transmission Cycle Of B. BurgdorferiZ01AI000906 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI GHERARDINI, FRANK · 2002 to 2008
$739k
The Role Of Alternate Sigma Factors In The Transmission Cycle Of B. BurgdorferiZIAAI000906 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI GHERARDINI, FRANK · 2009 to 2009
$105k
6 · The paper itself

Abstract

Myxococcus xanthus cells coordinate cellular motility, biofilm formation, and development through the use of cell signaling pathways. In an effort to understand the mechanisms underlying these processes, the inner membrane (IM) and outer membrane (OM) of strain DK1622 were fractionated to examine protein localization. Membranes were enriched from spheroplasts of vegetative cells and then separated into three peaks on a three-step sucrose gradient. The high-density fraction corresponded to the putative IM, the medium-density fraction corresponded to a putative hybrid membrane (HM), and the low-density fraction corresponded to the putative OM. Each fraction was subjected to further separation on discontinuous sucrose gradients, which resulted in discrete protein peaks for each major fraction. The purity and origin of each peak were assessed by using succinate dehydrogenase (SDH) activity as the IM marker and reactivities to lipopolysaccharide core and O-antigen monoclonal antibodies as the OM markers. As previously reported, the OM markers localized to the low-density membrane fractions, while SDH localized to high-density fractions. Immunoblotting was used to localize important motility and signaling proteins within the protein peaks. CsgA, the C-signal-producing protein, and FibA, a fibril-associated protease, were localized in the IM (density, 1.17 to 1.24 g cm(-3)). Tgl and Cgl lipoproteins were localized in the OM, which contained areas of high buoyant density (1.21 to 1.24 g cm(-3)) and low buoyant density (1.169 to 1.171 g cm(-3)). FrzCD, a methyl-accepting chemotaxis protein, was predominantly located in the IM, although smaller amounts were found in the OM. The HM peaks showed twofold enrichment for the type IV pilin protein PilA, suggesting that this fraction contained cell poles. Two-dimensional polyacrylamide gel electrophoresis revealed the presence of proteins that were unique to the IM and OM. Characterization of proteins in an unusually low-density membrane peak (1.072 to 1.094 g cm(-3)) showed the presence of Ta-1 polyketide synthetase, which synthesizes the antibiotic myxovirescin A.

Indexed as

Signal TransductionAnti-Bacterial AgentsBacterial ProteinsCell FractionationCell MembraneElectrophoresis, Polyacrylamide GelImmunoblottingLactonesMembrane ProteinsMultienzyme ComplexesMyxococcus xanthusAnti-Bacterial AgentsBacterial ProteinsCsgA protein, Myxococcus xanthusLactonesMembrane ProteinsMultienzyme Complexesmyxovirescin ATgl protein, Myxococcus xanthus

Identifiers

PMID12923079
PMCPMC181019
OpenAlexW2112375009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.