Evidence map›Paper›PMID 12911839›Full record

ArticleBMC gastroenterology2003

Analysis of antimicrobial susceptibility and virulence factors in Helicobacter pylori clinical isolates.

Anita Paula Ortiz Godoy, Marcelo Lima Ribeiro, Yune Helena Borges Benvengo, Lea Vitiello, Maira de Carvalho Bueno Miranda, Sergio Mendonça, José Pedrazzoli

Open access · goldAbstract read
In one paragraph

Article in BMC gastroenterology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 117 citations in OpenAlex.

  1. Trial
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  6. Effects of IntragastricJournal of clinical medicine · 2025
    Article
  7. Article
  8. Effects ofFrontiers in cellular and infection microbiology · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Can bacterial virulence factors predict antibiotic resistantWorld journal of gastroenterology · 2018
    Article
  15. Phenotypic analysis of antibiotic resistance and genotypic study of theAntimicrobial resistance and infection control · 2018
    Article
  16. Resistance ofWorld journal of gastroenterology · 2017
    Article
  17. Prevalence of cytotoxin-associated genes ofGastroenterology and hepatology from bed to bench · 2017
    Article
  18. Review
  19. Observational
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Anita Paula Ortiz GodoyClinical Pharmacology and Gastroenterology Unit, São Francisco University Medical School, Bragança Paulista, SP, Brazil. anita@helicobacter.com.br
Marcelo Lima Ribeiro
Yune Helena Borges Benvengo
Lea Vitiello
Maira de Carvalho Bueno Miranda
Sergio Mendonça
José Pedrazzoli
Universidade São Francisco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn this study, we evaluated the prevalence of primary resistance of Brazilian H. pylori isolates to metronidazole, clarithromycin, amoxicillin, tetracycline, and furazolidone. In addition, the vacA, iceA, cagA and cagE genotypes of strains isolated from Brazilian patients were determined and associated with clinical data in an effort to correlate these four virulence markers and antibiotic resistance.

methodsH. pylori was cultured in 155 H. pylori-positive patients and MICs for metronidazole, clarithromycin, amoxicillin, tetracycline, and furazolidone were determined by the agar dilution method. Genomic DNA was extracted, and allelic variants of vacA, iceA, cagA and cagE were identified by the polymerase chain reaction.

resultsThere was a strong association between the vacA s1/cagA -positive genotype and peptic ulcer disease (OR = 5.42, 95% CI 2.6-11.3, p = 0.0006). Additionally, infection by more virulent strains may protect against GERD, since logistic regression showed a negative association between the more virulent strain, vacA s1/cagA-positive genotype and GERD (OR = 0.26, 95% CI 0.08-0.8, p = 0.03). Resistance to metronidazole was detected in 75 patients (55%), to amoxicillin in 54 individuals (38%), to clarithromycin in 23 patients (16%), to tetracycline in 13 patients (9%), and to furazolidone in 19 individuals (13%). No significant correlation between pathogenicity and resistance or susceptibility was detected when MIC values for each antibiotic were compared with different vacA, iceA, cagA and cagE genotypes.

conclusionThe analysis of virulence genes revealed a specific association between H. pylori strains and clinical outcome, furthermore, no significant association was detected among pathogenicity and resistance or susceptibility.

Indexed as

Drug Resistance, BacterialAdultAnalysis of VarianceAntigens, BacterialAnti-Infective AgentsBacterial ProteinsFemaleGastroesophageal RefluxGenotypeHelicobacter pyloriHumansMaleOdds RatioPeptic UlcerVirulenceAntigens, BacterialAnti-Infective AgentsBacterial ProteinscagA protein, Helicobacter pyloriiceA1 protein, Helicobacter pyloriPicB protein, Helicobacter pyloriVacA protein, Helicobacter pylori

Identifiers

PMID12911839
PMCPMC194586
OpenAlexW1758348228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.