Evidence map›Paper›PMID 12911033›Full record

ArticleJournal of molecular evolution2003

A novel strategy for analysis of gene homologues and segmental genome duplications.

Vladimir N Noskov, Sun-Hee Leem, Greg Solomon, Michael Mullokandov, Ji-Youn Chae, Young-Ho Yoon, Young-Sun Shin, Natalay Kouprina, Vladimir Larionov

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. TAR Cloning: Perspectives for Functional Genomics, Biomedicine, and Biotechnology.Molecular therapy. Methods & clinical development · 2019
    Review
  3. Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Vladimir N NoskovLaboratory of Biosystems and Cancer, Center for Cancer Research, National Cancer Institute, NIH, Building 37, Room 5032, Bethesda, MD 20892, USA.
Sun-Hee Leem
Greg Solomon
Michael Mullokandov
Ji-Youn Chae
Young-Ho Yoon
Young-Sun Shin
Natalay Kouprina
Vladimir Larionov
Center for Cancer Research · USNational Cancer Institute · USDong-A University · KRNational Institute of Environmental Health Sciences · US

Funding

NIDCR NIH HHS DE-AI02-01ER63079
6 · The paper itself

Abstract

Transformation-associated recombination (TAR) cloning allows selective isolation of a desired chromosomal region or gene from complex genomes. The method exploits a high level of recombination between homologous DNA sequences during transformation in the yeast Saccharomyces cerevisiae. We investigated the effect of nonhomology on the efficiency of gene capture and found that up to 15% DNA divergence did not prevent efficient gene isolation. Such tolerance to DNA divergence greatly expands the potential applications of TAR cloning for comparative genomics. In this study, we were able to use the technique to isolate nonidentical chromosomal duplications and gene homologues.

Indexed as

Gene DuplicationSequence Homology, Nucleic AcidCentromereChromosomes, Artificial, BacterialChromosomes, Human, Pair 19Cloning, MolecularGenomeGenome, HumanHumansRecombination, GeneticSaccharomyces cerevisiaeSequence AlignmentTransformation, Genetic

Identifiers

PMID12911033
OpenAlexW2015939001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.