Evidence map›Paper›PMID 12900797›Full record

ArticleAmerican journal of human genetics2003

Age-related macular degeneration--a genome scan in extended families.

Jacek Majewski, Dennis W Schultz, Richard G Weleber, Mitchell B Schain, Albert O Edwards, Tara C Matise, Ted S Acott, Jurg Ott, Michael L Klein

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
16.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 202 citations in OpenAlex.

  1. Review
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  12. Tissue linkage through adjoining basement membranes: The long and the short term of it.Matrix biology : journal of the International Society for Matrix Biology · 2019
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11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jacek MajewskiLaboratory of Statistical Genetics, Rockefeller University, New York, NY, USA.
Dennis W Schultz
Richard G Weleber
Mitchell B Schain
Albert O Edwards
Tara C Matise
Ted S Acott
Jurg Ott
Michael L Klein
Oregon Health & Science University · USRockefeller University · USThe University of Texas Southwestern Medical Center · US

Funding

Proteomics CoreP30EY010572 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI TED S ACOTT · 1995 to 2026
$19.4M
BIOLOGY OF TRABECULAR RESPONSE TO LASER TRABECULOPLASTYR01EY008247 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI ACOTT, TED S · 1989 to 2017
$7.7M
VERTEBRATE EYE: STUDIES OF AQUEOUS OUTFLOWR01EY003279 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI ACOTT, TED S · 1985 to 2012
$5.5M
GENETICS OF AGE RELATED MACULAR DEGENERATIONR01EY012203 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI KLEIN, MICHAEL L · 1998 to 2007
$2.4M
LINKAGE ANALYSIS METHODS FOR HUMAN GENE MAPPINGR01HG000008 · NHGRI · ROCKEFELLER UNIVERSITY · PI OTT, JURG · 1990 to 2004
$1.2M
NEI NIH HHS EY 03279NEI NIH HHS EY 08247NEI NIH HHS EY 10572NEI NIH HHS EY 12203NEI NIH HHS P30 EY010572NEI NIH HHS R01 EY003279NEI NIH HHS R01 EY008247NEI NIH HHS R01 EY012203NHGRI NIH HHS HG00008NHGRI NIH HHS R01 HG000008
6 · The paper itself

Abstract

We performed a genomewide scan and genetic linkage analysis, to identify loci associated with age-related macular degeneration (AMD). We collected 70 families, ranging from small nuclear families to extended multigenerational pedigrees and consisting of a total of 344 affected and 217 unaffected members available for genotyping. We performed linkage analyses using parametric and allele-sharing models. We performed the analyses on the complete pedigrees but also subdivided the families into nuclear pedigrees. Finally, to dissect potential genetic factors responsible for differences in disease manifestation, we stratified the sample by two major AMD phenotypes (neovascular AMD and geographic atrophy) and by age of affected family members at the time of our evaluation. We have previously demonstrated linkage between AMD and 1q25-31 in a single large family. In the combined sample, we have detected the following loci with scores exceeding a LOD=2 cutoff under at least one of the models considered: 1q31 (HLOD=2.07 at D1S518), 3p13 (HLOD=2.19 at D3S1304/D3S4545), 4q32 (HLOD=2.66 at D4S2368, for the subset of families with predominantly dry AMD), 9q33 (LODZlr=2.01 at D9S930/D9S934), and 10q26 (HLOD=3.06 at D10S1230). Using correlation analysis, we have found a statistically significant correlation between LOD scores at 3p13 and 10q26, providing evidence for epistatic interactions between the loci and, hence, a complex basis of AMD. Our study has identified new loci that should be considered in future mapping and mutational analyses of AMD and has strengthened the evidence in support of loci suggested by other studies.

Indexed as

AgingChromosome MappingChromosomes, Human, Pair 1Chromosomes, Human, Pair 10Chromosomes, Human, Pair 3Chromosomes, Human, Pair 4Chromosomes, Human, Pair 9Genetic LinkageGenomeHumansLod ScoreMacular Degeneration

Identifiers

PMID12900797
PMCPMC1180679
OpenAlexW1967253078

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.