Evidence map›Paper›PMID 12898249›Full record

ArticleDevelopment genes and evolution2003

Isolation and characterization of two T-box genes from sponges, the phylogenetically oldest metazoan taxon.

Teresa Adell, Vladislav A Grebenjuk, Matthias Wiens, Werner E G Müller

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In one paragraph

Article in Development genes and evolution, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 59 citations in OpenAlex.

  1. Case report: A novelFrontiers in genetics · 2022
    Article
  2. Article
  3. Early evolution of the T-box transcription factor family.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  4. Article
  5. Article
  6. Article
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  9. Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
  10. Article
  11. Article
  12. 16S rRNA phylogeny of sponge-associated cyanobacteria.Applied and environmental microbiology · 2005
    Article
  13. Article
  14. Review
  15. Article
  16. Evo-devo of non-bilaterian animals.Genetics and molecular biology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Teresa AdellInstitut für Physiologische Chemie, Abteilung Angewandte Molekularbiologie, Universität Mainz, Duesbergweg 6, 55099 Mainz, Germany.
Vladislav A Grebenjuk
Matthias Wiens
Werner E G Müller
Johannes Gutenberg University Mainz · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is now well established that all metazoan phyla derived from one common ancestor, the hypothetical Urmetazoa. Due to the basal position of Porifera (Demospongiae) in the phylogenetic tree of Metazoa, studies on the mechanisms controlling the development of these animals can provide clues on the understanding of the origin of multicellular animals and on how the first organization of the body plan evolved. In this report we describe the isolation and genomic characterization of two T-box genes from the siliceous sponge Suberites domuncula. The phylogenetic analysis classifies one into the subfamily of Brachyury, Sd-Bra, and the second into the Tbx2 subfamily, Sd-Tbx2. Analyses of the Sd-Bra and Sd-Tbx2 sequences and their intron-exon structures demonstrate their basal position in the phylogeny of the T-box family, and allows us to hypothesize a model of the phylogenetic evolution of all T-box genes. Furthermore, we report the presence of two different products of alternative splicing of Sd-Bra, and demonstrate that they exist in different phosphorylation and glycosylation states in the sponge tissue. Sd-Bra expression in tissue and 3D-cell aggregates (primmorphs) is analyzed, suggesting that Sd-Bra might also have a role in Porifera morphogenesis.

Indexed as

Alternative SplicingAmino Acid SequenceAnimalsBase SequenceDNA, ComplementaryElectrophoresis, Gel, Two-DimensionalMolecular Sequence DataPhylogenyPoriferaProtein IsoformsProtein Processing, Post-TranslationalSequence Analysis, DNAT-Box Domain ProteinsDNA, ComplementaryProtein IsoformsT-Box Domain Protein 2T-Box Domain Proteins

Identifiers

PMID12898249
OpenAlexW2018991689

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.