Evidence map›Paper›PMID 12898067›Full record

ArticleImmunogenetics2003

A molecule bearing an immunoglobulin-like V region of the CTX subfamily in amphioxus.

Akie Sato, Werner E Mayer, Jan Klein

Abstract read
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. The descent of the antibody-based immune system by gradual evolution.Proceedings of the National Academy of Sciences of the United States of America · 2005
    Review
  6. Article
  7. Prototypic T cell receptor and CD4-like coreceptor are expressed by lymphocytes in the agnathan sea lamprey.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Akie SatoAbteilung Immungenetik, Max-Planck-Institut für Biologie, Corrensstrasse 42, 72076 Tübingen, Germany. akie.sato@tuebingen.mpg.de
Werner E Mayer
Jan Klein
Max Planck Institute for Biology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An expressed sequence tag with significant similarity to a vertebrate T-cell receptor (Tcr) sequence was found in a cDNA library prepared from the posterior part of the adult amphioxus, Branchiostoma lanceolatum ( Brla). Characterization of the corresponding cDNA clone revealed the presence of an open reading frame encoding a 351 amino acid residue-long polypeptide. The putative protein, tentatively designated Brla-VDB for "V-domain bearing", appears to consist of two domains. The N-terminal domain begins with a putative leader peptide followed by a sequence resembling the V domain of the CTX protein originally found to be expressed in the cortical thymocytes of the clawed frog Xenopus. The C-terminal domain of the VDB protein does not show significant sequence similarity to any entry in the databases and contains five hydrophobic segments separated by short intervening hydrophilic stretches. It may therefore belong to a protein that crosses the plasma membrane five times. These findings support the notion that V domains resembling those found in Tcrs evolved in nonvertebrates before the emergence of the adaptive immune system and may have participated in functions not involved directly in immunity.

Indexed as

Xenopus ProteinsAmino Acid SequenceAnimalsAntigens, Differentiation, T-LymphocyteBase SequenceChordata, NonvertebrateImmunoglobulin Variable RegionMembrane ProteinsMolecular Sequence DataSequence AlignmentAntigens, Differentiation, T-Lymphocytectx-A protein, XenopusImmunoglobulin Variable RegionMembrane ProteinsXenopus Proteins

Identifiers

PMID12898067
OpenAlexW2056316617

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.