Evidence map›Paper›PMID 12897146›Full record

ArticleMolecular and cellular biology2003

Xeroderma pigmentosum group A protein loads as a separate factor onto DNA lesions.

Suzanne Rademakers, Marcel Volker, Deborah Hoogstraten, Alex L Nigg, Martijn J Moné, Albert A Van Zeeland, Jan H J Hoeijmakers, Adriaan B Houtsmuller, Wim Vermeulen

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 153 citations in OpenAlex.

  1. Article
  2. Plant tolerance mechanisms to DNA-damaging UV stress.Journal of experimental botany · 2025
    Review
  3. Review
  4. Two interaction surfaces between XPA and RPA organize the preincision complex in nucleotide excision repair.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Article
  6. Mechanism of action of nucleotide excision repair machinery.Biochemical Society transactions · 2022
    Review
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  8. Article
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Suzanne RademakersCenter for Biomedical Genetics, Medical Genetic Center-Department of Cell Biology and Genetics, Josephine Nefkens Institute, Erasmus Medical Center, 3000 DR Rotterdam, The Netherlands.
Marcel Volker
Deborah Hoogstraten
Alex L Nigg
Martijn J Moné
Albert A Van Zeeland
Jan H J Hoeijmakers
Adriaan B Houtsmuller
Wim Vermeulen
University Medical Center · USUniversity of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide excision repair (NER) is the main DNA repair pathway in mammals for removal of UV-induced lesions. NER involves the concerted action of more than 25 polypeptides in a coordinated fashion. The xeroderma pigmentosum group A protein (XPA) has been suggested to function as a central organizer and damage verifier in NER. How XPA reaches DNA lesions and how the protein is distributed in time and space in living cells are unknown. Here we studied XPA in vivo by using a cell line stably expressing physiological levels of functional XPA fused to green fluorescent protein and by applying quantitative fluorescence microscopy. The majority of XPA moves rapidly through the nucleoplasm with a diffusion rate different from those of other NER factors tested, arguing against a preassembled XPA-containing NER complex. DNA damage induced a transient ( approximately 5-min) immobilization of maximally 30% of XPA. Immobilization depends on XPC, indicating that XPA is not the initial lesion recognition protein in vivo. Moreover, loading of replication protein A on NER lesions was not dependent on XPA. Thus, XPA participates in NER by incorporation of free diffusing molecules in XPC-dependent NER-DNA complexes. This study supports a model for a rapid consecutive assembly of free NER factors, and a relatively slow simultaneous disassembly, after repair.

Indexed as

DNA RepairCell LineCell NucleusDNA-Binding ProteinsDNA, ComplementaryDNA DamageDose-Response Relationship, RadiationFibroblastsGreen Fluorescent ProteinsHumansImmunoblottingLightLuminescent ProteinsMicroscopy, ConfocalMicroscopy, FluorescenceModels, BiologicalDNA-Binding ProteinsDNA, ComplementaryGreen Fluorescent ProteinsLuminescent ProteinsPeptidesXeroderma Pigmentosum Group A ProteinXPA protein, human

Identifiers

PMID12897146
PMCPMC166334
OpenAlexW2165125584

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.