Evidence map›Paper›PMID 12897052›Full record

ArticleGenes & development2003

Structural basis for specific binding of Polycomb chromodomain to histone H3 methylated at Lys 27.

Jinrong Min, Yi Zhang, Rui-Ming Xu

Abstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 340 papers.

0numbers the graph read from it
0cells of the map it votes in
340citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

340 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. The Many Faces of SetDB1.Epigenomes · 2026
    Review
  9. Review
  10. Polycomb-mediated 3D chromatin interactions in gene regulation.Current opinion in genetics & development · 2026
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

280 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jinrong MinW.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York 11724, USA.
Yi Zhang
Rui-Ming Xu

Funding

STRUCTURE STUDIES OF TRANSCRIPTIONAL SILENCINGR01GM063716 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI XU, RUI-MING · 2001 to 2010
$2.9M
NIGMS NIH HHS GM63070NIGMS NIH HHS GM63716NIGMS NIH HHS R01 GM063716
6 · The paper itself

Abstract

The chromodomain of Drosophila Polycomb protein is essential for maintaining the silencing state of homeotic genes during development. Recent studies suggest that Polycomb mediates the assembly of repressive higher-order chromatin structures in conjunction with the methylation of Lys 27 of histone H3 by a Polycomb group repressor complex. A similar mechanism in heterochromatin assembly is mediated by HP1, a chromodomain protein that binds to histone H3 methylated at Lys 9. To understand the molecular mechanism of the methyl-Lys 27 histone code recognition, we have determined a 1.4-A-resolution structure of the chromodomain of Polycomb in complex with a histone H3 peptide trimethylated at Lys 27. The structure reveals a conserved mode of methyl-lysine binding and identifies Polycomb-specific interactions with histone H3. The structure also reveals a dPC dimer in the crystal lattice that is mediated by residues specifically conserved in the Polycomb family of chromodomains. The dimerization of dPC can effectively account for the histone-binding specificity and provides new mechanistic insights into the function of Polycomb. We propose that self-association is functionally important for Polycomb.

Indexed as

MethylationAmino Acid SequenceAnimalsChromatinCrystallography, X-RayDrosophilaDrosophila ProteinsGlutathione TransferaseHeterochromatinHistonesLysineModels, MolecularMolecular Sequence DataPolycomb Repressive Complex 1Protein BindingProtein Structure, TertiaryChromatinDrosophila ProteinsGlutathione TransferaseHeterochromatinHistonesLysinePc protein, DrosophilaPolycomb Repressive Complex 1Recombinant Fusion Proteins

Identifiers

PMID12897052
PMCPMC196225

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.