Evidence map›Paper›PMID 12896994›Full record

ArticleJournal of bacteriology2003

In vivo and in vitro evidence that TtgV is the specific regulator of the TtgGHI multidrug and solvent efflux pump of Pseudomonas putida.

Antonia Rojas, Ana Segura, María Eugenia Guazzaroni, Wilson Terán, Ana Hurtado, María Trinidad Gallegos, Juan L Ramos

Abstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. AmrZ and FleQ Co-regulate Cellulose Production inFrontiers in microbiology · 2019
    Article
  9. Molecular control of gene expression byThe Journal of biological chemistry · 2018
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. The TetR family of regulators.Microbiology and molecular biology reviews : MMBR · 2013
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Antonia RojasDepartment of Plant Biochemistry and Molecular and Cellular Biology, Consejo Superior de Investigaciones Cientificas, Estación Experimental del Zaidín, E-18008 Granada, Spain.
Ana Segura
María Eugenia Guazzaroni
Wilson Terán
Ana Hurtado
María Trinidad Gallegos
Juan L Ramos

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The TtgGHI efflux pump of Pseudomonas putida DOT-T1E plays a key role in the innate and induced tolerance of this strain to aromatic hydrocarbons and antibiotics. The ttgGHI operon is expressed constitutively from two overlapping promoters in the absence of solvents and at a higher level in their presence, but not in response to antibiotics. Adjacent to the ttgGHI operon is the divergently transcribed ttgVW operon. In TtgV-deficient backgrounds, although not in a TtgW-deficient background, expression of the ttgGHI and ttgVW operons increased fourfold. This suggests that TtgV represses expression from the ttgG promoters and controls its own. TtgW plays no major role in the regulation of expression of these promoters. Primer extension revealed that the divergent ttgG and ttgV promoters overlap, and mobility shift assays indicated that TtgV binds to this region with high affinity. DNaseI footprint assays revealed that TtgV protected four DNA helical turns that include the -10 and -35 boxes of the ttgV and ttgG promoters.

Indexed as

Gene Expression Regulation, BacterialOperonPromoter Regions, GeneticBacterial ProteinsBase SequenceCarrier ProteinsMembrane Transport ProteinsMicrobial Sensitivity TestsMolecular Sequence DataPseudomonas putidaRepressor ProteinsSolventsTolueneTranscription, GeneticBacterial ProteinsCarrier ProteinsMembrane Transport ProteinsRepressor ProteinsSolventsTolueneTtgG protein, Pseudomonas putidaTtgH protein, Pseudomonas putidaTtgI protein, Pseudomonas putida

Identifiers

PMID12896994
PMCPMC166463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.