Evidence map›Paper›PMID 12886250›Full record

ArticleLeukemia2003

Proteomic analysis of the cell-surface membrane in chronic lymphocytic leukemia: identification of two novel proteins, BCNP1 and MIG2B.

R S Boyd, P J Adam, S Patel, J A Loader, J Berry, N T Redpath, H R Poyser, G C Fletcher, N A Burgess, A C Stamps and 9 more

Abstract read
PubMed Publisher
In one paragraph

Article in Leukemia, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
  2. Article
  3. Frontiers in cell and developmental biology · 2022
    Review
  4. Review
  5. Structural Insight on Functional Regulation of Human MINERVA Protein.International journal of molecular sciences · 2020
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

R S BoydOxford Glycosciences (UK) Ltd, Abingdon, Oxford, UK.
P J Adam
S Patel
J A Loader
J Berry
N T Redpath
H R Poyser
G C Fletcher
N A Burgess
A C Stamps
L Hudson
P Smith
M Griffiths
T G Willis
E L Karran
D G Oscier
D Catovsky
J A Terrett
M J S Dyer
Institute of Cancer Research · GBMRC Toxicology Unit · GBRoyal Bournemouth Hospital · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

B-cell-specific plasma-membrane proteins are potential targets for either small molecule or antibody-based therapies. We have sought to annotate proteins expressed at the cell surface membrane in patients with chronic lymphocytic leukemia (CLL) using plasma-membrane-based proteomic analysis to identify previously uncharacterized and potentially B-cell-specific proteins. Proteins from plasma-membrane fractions were separated on one-dimensional gels and trypsinized fractions subjected to high-throughput MALDI-TOF mass spectrometry. Using this method, many known B-cell surface antigens were detected, but also known proteins not previously described in this disease or in this cellular compartment, including cell surface receptors, membrane-associated enzymes and secreted proteins, and completely unknown proteins. To validate the method, we show that BLK, a B-cell-specific kinase, is located in the CLL-plasma-membrane fraction. We also describe two novel proteins (MIG2B and B-cell novel protein #1, BCNP1), which are expressed preferentially in B cells. MIG2B is in a highly conserved and defined gene family containing two plasma-membrane-binding ezrin/radixin/moesin domains and a pleckstrin homology domain; the Caenorhabditis elegans homolog (UNC-112) is a membrane-associated protein that colocalizes with integrin at cell-matrix adhesion complexes. BCNP1 is a completely unknown protein with three predicted transmembrane domains, with three alternatively spliced final exons. Proteomic analysis may thus define new potential therapeutic targets.

Indexed as

ProteomicsApoptosis Regulatory ProteinsBase SequenceBlotting, WesternB-LymphocytesHumansLeukemia, Lymphocytic, Chronic, B-CellMembrane ProteinsMolecular Sequence DataNeoplasm ProteinsOpen Reading FramesProtein IsoformsProtein Structure, TertiarySpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationApoptosis Regulatory ProteinsFERMT3 protein, humanMembrane ProteinsNeoplasm ProteinsNIBAN3 protein, humanProtein Isoforms

Identifiers

PMID12886250
OpenAlexW2016810996

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.