Evidence map›Paper›PMID 12884004›Full record

ArticleHuman genetics2003

Exon skipping caused by an intronic insertion of a young Alu Yb9 element leads to severe hemophilia A.

Arupa Ganguly, Tanya Dunbar, Peiqin Chen, Lynn Godmilow, Tapan Ganguly

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. A NovelHuman mutation · 2023
    Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. Article
  10. Alu insertion variants alter mRNA splicing.Nucleic acids research · 2019
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Structural variants caused byProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  16. Structural Variation ofGenomics & informatics · 2016
    Review
  17. Review
  18. Natural variation in ARF18 gene simultaneously affects seed weight and silique length in polyploid rapeseed.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Arupa GangulyDepartment of Genetics, University of Pennsylvania, Philadelphia, PA 19104, USA. ganguly@mail.med.upenn.edu
Tanya Dunbar
Peiqin Chen
Lynn Godmilow
Tapan Ganguly
University of Pennsylvania · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Short interspersed elements, such as Alu elements, have propagated to more than one million copies in the human genome. They affect the genome in several ways, caused by retrotransposition, recombination between elements, gene conversion, and alterations in gene expression. These events, including novel insertions into active genes, have been associated with a number of human disorders. Hemophilia A is an X-linked severe bleeding disorder and is caused by mutations in the Factor VIII gene. The spectrum of mutations includes point mutations, rearrangements, insertions, and deletions. Recently, an Alu retrotransposition event in a coding exon has been reported in a family with a severe form of hemophilia A. This was the first report of an Alu insertion in the Factor VIII gene. Here, we report a second Alu insertion event that lies in an intron of the same gene that causes exon skipping and the complete disruption of gene expression.

Indexed as

Alternative SplicingAlu ElementsBase SequenceChildExonsHemophilia AHumansIntronsMaleMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionSequence Analysis, RNA

Identifiers

PMID12884004
OpenAlexW1990624082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.