Evidence map›Paper›PMID 12881720›Full record

ArticleNature structural biology2003

Structure of a specific alcohol-binding site defined by the odorant binding protein LUSH from Drosophila melanogaster.

Schoen W Kruse, Rui Zhao, Dean P Smith, David N M Jones

Erratum issuedAbstract read
In one paragraph

Article in Nature structural biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

  1. Trial
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Alcohol-induced Aggression.Neuroscience insights · 2021
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors.

Schoen W KruseDepartment of Pharmacology, University of Colorado Health Sciences Center, M/S C236, 4200 East Ninth Avenue, Denver, Colorado 80262, USA.
Rui Zhao
Dean P Smith
David N M Jones

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
GENETIC ANALYSIS OF OLFACTIONR01DC002539 · NIDCD · UT SOUTHWESTERN MEDICAL CENTER · PI SMITH, DEAN P. · 1995 to 2013
$4.3M
The Molecular Basis of Alcohol's ActionsR01AA013618 · NIAAA · UNIVERSITY OF COLORADO DENVER · PI JONES, DAVID NIGEL · 2003 to 2010
$2.2M
NCI NIH HHS P30 CA046934NIAAA NIH HHS R01 AA013618NIDCD NIH HHS R01 DC002539
6 · The paper itself

Abstract

We have solved the high-resolution crystal structures of the Drosophila melanogaster alcohol-binding protein LUSH in complex with a series of short-chain n-alcohols. LUSH is the first known nonenzyme protein with a defined in vivo alcohol-binding function. The structure of LUSH reveals a set of molecular interactions that define a specific alcohol-binding site. A group of amino acids, Thr57, Ser52 and Thr48, form a network of concerted hydrogen bonds between the protein and the alcohol that provides a structural motif to increase alcohol-binding affinity at this site. This motif seems to be conserved in a number of mammalian ligand-gated ion channels that are directly implicated in the pharmacological effects of alcohol. Further, these sequences are found in regions of ion channels that are known to confer alcohol sensitivity. We suggest that the alcohol-binding site in LUSH represents a general model for alcohol-binding sites in proteins.

Indexed as

AlcoholsAmino Acid MotifsAmino Acid SequenceAnimalsBinding SitesButanolsCrystallography, X-RayDrosophila melanogasterHydrogen BondingIonsLigandsMagnetic Resonance SpectroscopyModels, MolecularMolecular Sequence DataProtein BindingProtein ConformationAlcoholsButanolsIonsLigandsodorant-binding proteinReceptors, OdorantSerineThreonine

Identifiers

PMID12881720
PMCPMC4397894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.