Evidence map›Paper›PMID 12881717›Full record

ArticleOncogene2003

Identification of genes differentially expressed in mouse mammary epithelium transformed by an activated beta-catenin.

Jean-Pierre Renou, Brian Bierie, Keiko Miyoshi, Yongzhi Cui, Jean Djiane, Moshe Reichenstein, Moshe Shani, Lothar Hennighausen

Abstract read
PubMed Publisher
In one paragraph

Article in Oncogene, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Upregulation of CENPM promotes hepatocarcinogenesis through mutiple mechanisms.Journal of experimental & clinical cancer research : CR · 2019
    Article
  5. Article
  6. Establishment of the vertebrate kinetochores.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012
    Review
  7. The ABCs of CENPs.Chromosoma · 2011
    Review
  8. Article
  9. Article
  10. Article
  11. Do 'basal-like' breast cancers really exist?Nature reviews. Cancer · 2009
    Review
  12. Review
  13. Glycolipid transfer proteins.Biochimica et biophysica acta · 2007
    Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Jean-Pierre RenouLaboratory of Genetics and Physiology, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA.
Brian Bierie
Keiko Miyoshi
Yongzhi Cui
Jean Djiane
Moshe Reichenstein
Moshe Shani
Lothar Hennighausen
Agricultural Research Organization · ILNational Institute of Diabetes and Digestive and Kidney Diseases · USNational Institutes of Health · USDépartement Génétique Animale · FRTokushima University · JP

Funding

Genetic Approaches To Understanding Organ Development and FunctionZIADK061000 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI HENNIGHAUSEN, LOTHAR · 2009 to 2025
$24.7M
Genetic Understanding Of Organ Development And FunctionZ01DK061000 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI HENNIGHAUSEN, LOTHAR · 1998 to 2008
$851k
6 · The paper itself

Abstract

Beta-catenin is an executor of Wnt signaling and it can control cell fate and specification. Deletion of exon 3 from the endogenous beta-catenin gene in differentiating mammary alveolar epithelium of the mouse results in the generation of an activated protein that lacks amino acids 5-80. This is accompanied by a loss of mammary epithelial differentiation and a transdifferentiation process to squamous metaplasias. To further understand the molecular process of transdifferentiation, the expression of genes in mammary tissue was profiled in the absence and presence of activated of beta-catenin. Microarrays were generated that carry about 8500 cDNA clones with approximately 6000 obtained from mammary tissue. Mutant tissues, which had undergone either partial (TD1) or complete (TD2) squamous transdifferentiation, were compared with wild-type mammary tissue. Four groups of genes were identified. Group 1 contained genes whose expression was induced in both mutant tissues. Groups 2 and 3 contained genes that were active preferentially in TD2 and TD1, respectively. Group 4 contained genes suppressed in both samples. Using this approach, known and unknown genes activated in the transdifferentiation process were identified. A new 20 kDa protein (PANE1) induced upon transdifferentiation was nuclear in nonconfluent cells and cytoplasmic in confluent or dividing cells. Lastly, stabilization of beta-catenin resulted in the retention of differentiated epithelium upon involution and altered activities of several proteases in transdifferentiated mammary epithelium.

Indexed as

Cell Transformation, NeoplasticGene Expression ProfilingAmino Acid SequenceAnimalsbeta CateninCell DifferentiationConserved SequenceCytoskeletal ProteinsEndopeptidasesEpidermisEpithelial CellsFemaleLactationMammary Glands, AnimalMammary Neoplasms, ExperimentalMicebeta CateninCTNNB1 protein, mouseCytoskeletal ProteinsEndopeptidasesTrans-Activators

Identifiers

PMID12881717
OpenAlexW2043599946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.