ArticleInfection and immunity2003
Comparative genomic indexing reveals the phylogenomics of Escherichia coli pathogens.
Article in Infection and immunity, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
36 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.
- Large-scale comparative genomics meta-analysis of Campylobacter jejuni isolates reveals low level of genome plasticity.Journal of clinical microbiology · 2004Pooled it
- The "Big Six": Hidden Emerging Foodborne Bacterial Pathogens.Tropical medicine and infectious disease · 2022Review
- FDA Escherichia coli Identification (FDA-ECID) Microarray: a Pangenome Molecular Toolbox for Serotyping, Virulence Profiling, Molecular Epidemiology, and Phylogeny.Applied and environmental microbiology · 2016Article
- Highly Virulent Non-O157 Enterohemorrhagic Escherichia coli (EHEC) Serotypes Reflect Similar Phylogenetic Lineages, Providing New Insights into the Evolution of EHEC.Applied and environmental microbiology · 2015Article
- Norwegian sheep are an important reservoir for human-pathogenic Escherichia coli O26:H11.Applied and environmental microbiology · 2012Article
- Potentially human-pathogenic Escherichia coli O26 in Norwegian sheep flocks.Applied and environmental microbiology · 2011Article
- Comparison of 61 sequenced Escherichia coli genomes.Microbial ecology · 2010Review
- Comparison of genotypes of Salmonella enterica serovar Enteritidis phage type 30 and 9c strains isolated during three outbreaks associated with raw almonds.Applied and environmental microbiology · 2010Article
- Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase.BMC systems biology · 2009Article
- Evidence of pathogenic subgroups among atypical enteropathogenic Escherichia coli strains.Journal of clinical microbiology · 2009Article
- Article
- A DNase encoded by integrated element CJIE1 inhibits natural transformation of Campylobacter jejuni.Journal of bacteriology · 2009Article
- Performance of a 70-mer oligonucleotide microarray for genotyping of Campylobacter jejuni.BMC microbiology · 2008Article
- Transcriptomics and adaptive genomics of the asymptomatic bacteriuria Escherichia coli strain 83972.Molecular genetics and genomics : MGG · 2008Article
- Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa.PloS one · 2008Article
- Genetic diversity among Escherichia coli O157:H7 isolates and identification of genes linked to human infections.Infection and immunity · 2008Article
- A process for analysis of microarray comparative genomics hybridisation studies for bacterial genomes.BMC genomics · 2008Article
- Use of genomic DNA control features and predicted operon structure in microarray data analysis: ArrayLeaRNA - a Bayesian approach.BMC bioinformatics · 2007Article
- Common genomic features of Campylobacter jejuni subsp. doylei strains distinguish them from C. jejuni subsp. jejuni.BMC microbiology · 2007Article
- Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans.Applied and environmental microbiology · 2007Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The Escherichia coli O26 serogroup includes important food-borne pathogens associated with human and animal diarrheal disease. Current typing methods have revealed great genetic heterogeneity within the O26 group; the data are often inconsistent and focus only on verotoxin (VT)-positive O26 isolates. To improve current understanding of diversity within this serogroup, the genomic relatedness of VT-positive and -negative O26 strains was assessed by comparative genomic indexing. Our results clearly demonstrate that irrespective of virulence characteristics and pathotype designation, the O26 strains show greater genomic similarity to each other than to any other strain included in this study. Our data suggest that enteropathogenic and VT-expressing E. coli O26 strains represent the same clonal lineage and that VT-expressing E. coli O26 strains have gained additional virulence characteristics. Using this approach, we established the core genes which are central to the E. coli species and identified regions of variation from the E. coli K-12 chromosomal backbone.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.