Evidence map›Paper›PMID 12869583›Full record

ArticleGenes & development2003

Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: a mammalian cell culture model of gene variegation.

Kasirajan Ayyanathan, Mark S Lechner, Peter Bell, Gerd G Maul, David C Schultz, Yoshihiko Yamada, Kazuhiro Tanaka, Kiyoyuki Torigoe, Frank J Rauscher

Abstract read
In one paragraph

Article in Genes & development, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 178 papers.

0numbers the graph read from it
0cells of the map it votes in
178citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

178 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. HP1-Mediated Silencing of theJournal of developmental biology · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

118 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Kasirajan AyyanathanThe Wistar Institute, Philadelphia, Pennsylvania 19104-4268, USA.
Mark S Lechner
Peter Bell
Gerd G Maul
David C Schultz
Yoshihiko Yamada
Kazuhiro Tanaka
Kiyoyuki Torigoe
Frank J Rauscher

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
TRAINING PROGRAM IN BASIC CANCER RESEARCHT32CA009171 · NCI · WISTAR INSTITUTE · PI Alessandro Gardini · 1985 to 2026
$15.3M
EARLY INTERACTIONS OF DNA VIRUSES AND HOSTR01AI041136 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 1998 to 2005
$1.8M
Role of the BRCA1 Associated Protein BAP1 in DNA RepairR01CA092088 · NCI · WISTAR INSTITUTE · PI RAUSCHER, FRANK J. · 2001 to 2005
$1.8M
Gene Regulation /Function Of CartilageZ01DE000483 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI YAMADA, YOSHIHIKO · 1990 to 2008
$1.7M
Functions of the SNAG Repression Domain in OncogenesisR01CA095561 · NCI · WISTAR INSTITUTE · PI RAUSCHER, FRANK J. · 2003 to 2007
$1.5M
Characterization of a Potential Nuclear Protein DepotR01GM064691 · NIGMS · WISTAR INSTITUTE · PI MAUL, GERD G · 2002 to 2005
$1.3M
Early interactions of DNA viruses and hostR56AI041136 · NIAID · WISTAR INSTITUTE · PI KAUFMAN, RUSSEL E. · 2008 to 2009
$828k
Role of SNAG Corepressors in Repression and OncogenesisK01CA095620 · NCI · WISTAR INSTITUTE · PI AYYANATHAN, KASIRAJAN · 2002 to 2006
$671k
HIV DNA vaccine improvement by nuclear targetingR21AI052742 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 2002 to 2003
$502k
Generation of Herps Viruses for in Vivo ObservationR03AI053237 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 2003 to 2004
$165k
EARLY INTERACTIONS OF DNA VIRUSES AND HOSTR21AI041136 · NIAID · WISTAR INSTITUTE · PI MAUL, GERD G · 1997 to 1997
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NCI NIH HHS CA09171NCI NIH HHS CA095561NCI NIH HHS CA095620NCI NIH HHS CA10815NCI NIH HHS CA92088NCI NIH HHS K01 CA095620NCI NIH HHS P30 CA010815NCI NIH HHS R01 CA092088NCI NIH HHS R01 CA095561NCI NIH HHS T32 CA009171NIAID NIH HHS AI41136NIAID NIH HHS AI52742NIAID NIH HHS AI53237NIAID NIH HHS R01 AI041136NIAID NIH HHS R03 AI053237NIAID NIH HHS R56 AI041136NIGMS NIH HHS GM64691NIGMS NIH HHS R01 GM064691
6 · The paper itself

Abstract

Heterochromatin protein 1 (HP1) is a key component of constitutive heterochromatin in Drosophila and is required for stable epigenetic gene silencing classically observed as position effect variegation. Less is known of the family of mammalian HP1 proteins, which may be euchromatic, targeted to expressed loci by repressor-corepressor complexes, and retained there by Lys 9-methylated histone H3 (H3-MeK9). To characterize the physical properties of euchromatic loci bound by HP1, we developed a strategy for regulated recruitment of HP1 to an expressed transgene in mammalian cells by using a synthetic, hormone-regulated KRAB repression domain. We show that its obligate corepressor, KAP1, can coordinate all the machinery required for stable gene silencing. In the presence of hormone, the transgene is rapidly silenced, spatially recruited to HP1-rich nuclear regions, assumes a compact chromatin structure, and is physically associated with KAP1, HP1, and the H3 Lys 9-specific methyltransferase, SETDB1, over a highly localized region centered around the promoter. Remarkably, silencing established by a short pulse of hormone is stably maintained for >50 population doublings in the absence of hormone in clonal-cell populations, and the silent transgenes in these clones show promoter hypermethylation. Thus, like variegation in Drosophila, recruitment of mammalian HP1 to a euchromatic promoter can establish a silenced state that is epigenetically heritable.

Indexed as

Gene SilencingMitosis3T3 CellsAmino Acid MotifsAnimalsCell Culture TechniquesCell LineChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNA MethylationEndonucleasesGenes, ReporterHistonesHydroxytestosteronesIn Situ Hybridization, Fluorescence4,17 beta-dihydroxy-4-androstene-3-oneChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneEndonucleasesHistonesHydroxytestosteronesLuciferasesLysineRNA, Messenger

Identifiers

PMID12869583
PMCPMC196232

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.