Evidence map›Paper›PMID 12869302›Full record

ArticleNeoplasia (New York, N.Y.)

Expression profile of a gamma-deletion variant of the human telomerase reverse transcriptase gene.

Hisashi Hisatomi, Kazuma Ohyashiki, Junko H Ohyashiki, Kumi Nagao, Taichi Kanamaru, Hiroyuki Hirata, Nozomu Hibi, Yutaka Tsukada

Abstract readComparative Study
In one paragraph

Article in Neoplasia (New York, N.Y.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
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  8. Review
  9. TERT-Regulation and Roles in Cancer Formation.Frontiers in immunology · 2020
    Review
  10. Article
  11. Non-canonical Roles of Telomerase: Unraveling the Imbroglio.Frontiers in cell and developmental biology · 2019
    Review
  12. Article
  13. Review
  14. Review
  15. Oncogenic fusion protein EWS-FLI1 is a network hub that regulates alternative splicing.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Hisashi HisatomiCenter for Molecular Biology and Cytogenetics, SRL Inc., 5-6-50 Shin-machi Hino, Tokyo, Japan. hisatomi@srl.srl-inc.co.jp
Kazuma Ohyashiki
Junko H Ohyashiki
Kumi Nagao
Taichi Kanamaru
Hiroyuki Hirata
Nozomu Hibi
Yutaka Tsukada

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human telomerase reverse transcriptase (hTERT) is an essential component of the holoenzyme complex that adds telomeric repeats to the ends of chromosomes. The hTERT transcript has been shown to have two deletion type alternative splicing sites. One deletion site induces the alpha-deletion variant, lacking 36 bp from exon 6, and the other induces the beta-deletion variant, lacking 182 bp from exons 7 and 8. Here, we identified a novel deletion variant of the hTERT transcript in hepatocellular carcinoma cell lines. The deleted transcript was characterized by an in-frame deletion of 189 bp, spanning nucleotides 2710 to 2898, corresponding to the complete loss of exon 11 (gamma-deletion). The region lacking in the gamma-deletion lies within RT motifs D and E, suggesting that it is missing conserved residues from the catalytic core of the protein. Both gamma- and alpha-deletion variants were occasionally detected, but the beta-deletion variant was frequently observed. Our results may provide important information for more detailed studies on the regulation of telomerase activity.

Indexed as

Gene DeletionAlternative SplicingBase SequenceCell LineDNA-Binding ProteinsHumansIsoenzymesMolecular Sequence DataReverse Transcriptase Polymerase Chain ReactionRNA, MessengerTelomeraseDNA-Binding ProteinsIsoenzymesRNA, MessengerTelomerase

Identifiers

PMID12869302
PMCPMC1502410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.