Evidence map›Paper›PMID 12867436›Full record

ArticleJournal of bacteriology2003

Expression of the secondary sigma factor sigmaX in Streptococcus pyogenes is restricted at two levels.

Jason A Opdyke, June R Scott, Charles P Moran

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. The ComRS-SigX pathway regulates natural transformation inbioRxiv : the preprint server for biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jason A OpdykeDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, Georgia 30322, USA.
June R Scott
Charles P Moran
Emory University · US

Funding

MOLECULAR MECHANISMS OF MICROBIAL PATHOGENESIST32AI007470 · NIAID · EMORY UNIVERSITY · PI SPECK, SAMUEL H · 1995 to 2010
$3.2M
RNA Polymerase Sigma Factors in Streptococcus pyogenesR01AI049013 · NIAID · EMORY UNIVERSITY · PI MORAN, CHARLES P. · 2002 to 2005
$1.1M
INDUCIBLE EXPRESSION OF SEMI-SYNTHETIC ANTIBODY GENESF32AI007470 · NIAID · UNIVERSITY OF WASHINGTON · PI HILLSON, JAN L · 1986 to 1989
–
NIAID NIH HHS AI049013NIAID NIH HHS AI07470NIAID NIH HHS F32 AI007470NIAID NIH HHS R01 AI049013NIAID NIH HHS T32 AI007470
6 · The paper itself

Abstract

Secondary RNA polymerase sigma factors in many bacteria are responsible for regulating a vast range of processes including virulence. A protein (sigma(X)) in the gram-positive human pathogen Streptococcus pyogenes (the group A Streptococcus or GAS) was recently shown to function in vitro as a secondary sigma factor. We report here the isolation of a mutant in which both sigX genes are inactivated, show that sigma(X) functions in GAS cells, and show that the amount of sigma(X) is controlled at two levels. Primer extension analysis indicates that sigX transcription is low in GAS cells grown in Todd-Hewitt yeast broth, and immunoblot assays with a sigma(X)-specific polyclonal antibody demonstrate that the protein does not accumulate in these cells. To increase the level of sigX transcription in GAS, we constructed a strain that constitutively expresses the sigX gene from a heterologous promoter. Expression of sigX from this promoter led to transcription of the sigma(X)-dependent cinA promoter in GAS cells. We found that expression of the sigX gene in a clpP mutant strain resulted in greater accumulation of sigma(X) protein, which resulted in higher levels of transcription from the sigma(X)-dependent promoters cinA, smf, and cglA. In addition, a clpP mutant containing sigX only at its wild-type loci on the chromosome generated more transcription from the sigma(X)-dependent cinA promoter than did the wild-type parental strain. Therefore, sigma(X) activity in GAS is limited by low-level transcription of the sigX structural genes and by clpP, which appears to negatively regulate sigma(X) accumulation.

Indexed as

Gene Expression Regulation, BacterialAdenosine TriphosphatasesBacterial ProteinsCulture MediaEndopeptidase ClpHumansImmunoblottingMutationPromoter Regions, GeneticSerine EndopeptidasesSigma FactorStreptococcus pyogenesTranscription, GeneticAdenosine TriphosphatasesBacterial ProteinsCulture MediaEndopeptidase ClpSerine EndopeptidasesSigma Factor

Identifiers

PMID12867436
PMCPMC165779
OpenAlexW2078390085

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.