Evidence map›Paper›PMID 12861002›Full record

ArticleMolecular and cellular biology2003

Transcription enhancer factor 1 binds multiple muscle MEF2 and A/T-rich elements during fast-to-slow skeletal muscle fiber type transitions.

Natalia Karasseva, Gretchen Tsika, Juan Ji, Aijing Zhang, Xiaoqing Mao, Richard Tsika

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 53 citations in OpenAlex.

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  6. The Hippo signal transduction network for exercise physiologists.Journal of applied physiology (Bethesda, Md. : 1985) · 2016
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  17. IGF-I activates the mouse type IIb myosin heavy chain gene.American journal of physiology. Cell physiology · 2009
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Natalia KarassevaDepartment of Biochemistry, School of Medicine, University of Missouri-Columbia, 1600 Rollins Road, Columbia, MO 65211, USA.
Gretchen Tsika
Juan Ji
Aijing Zhang
Xiaoqing Mao
Richard Tsika
University of Missouri · US

Funding

ALTERED MECHANICAL LOADS AND SKELETAL MUSCLE PHENOTYPER01AR047197 · NIAMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI TSIKA, RICHARD W · 2000 to 2009
$3.2M
EXERCISE HYPERTROPHY AND CONTROL OF MYOSIN INDUCTIONR01AR041464 · NIAMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI TSIKA, RICHARD W · 1992 to 2008
$2.2M
NIAMS NIH HHS AR 41464NIAMS NIH HHS AR 47197NIAMS NIH HHS R01 AR041464NIAMS NIH HHS R01 AR047197
6 · The paper itself

Abstract

In adult mouse skeletal muscle, beta-myosin heavy chain (betaMyHC) gene expression is primarily restricted to slow type I fibers; however, its expression can be induced in fast type II fibers in response to a sustained increase in load-bearing work (mechanical overload [MOV]). Our previous betaMyHC transgenic and protein-DNA interaction studies have identified an A/T-rich element (betaA/T-rich -269/-258) that is required for slow muscle expression and which potentiates MOV responsiveness of a 293-bp betaMyHC promoter (beta293wt). Despite the GATA/MEF2-like homology of this element, we found binding of two unknown proteins that were antigenically distinct from GATA and MEF2 isoforms. By using the betaA/T-rich element as bait in a yeast one-hybrid screen of an MOV-plantaris cDNA library, we identified nominal transcription enhancer factor 1 (NTEF-1) as the specific betaA/T-rich binding factor. Electrophoretic mobility shift assay analysis confirmed that NTEF-1 represents the enriched binding activity obtained only when the betaA/T-rich element is reacted with MOV-plantaris nuclear extract. Moreover, we show that TEF proteins bind MEF2 elements located in the control region of a select set of muscle genes. In transient-coexpression assays using mouse C2C12 myotubes, TEF proteins transcriptionally activated a 293-bp betaMyHC promoter devoid of any muscle CAT (MCAT) sites, as well as a minimal thymidine kinase promoter-luciferase reporter gene driven by three tandem copies of the desmin MEF2 or palindromic Mt elements or four tandem betaA/T-rich elements. These novel findings suggest that in addition to exerting a regulatory effect by binding MCAT elements, TEF proteins likely contribute to regulation of skeletal, cardiac, and smooth muscle gene networks by binding select A/T-rich and MEF2 elements under basal and hypertrophic conditions.

Indexed as

Nuclear ProteinsAnimalsBase SequenceBinding SitesBlotting, NorthernBlotting, WesternCell LineCell NucleusCytosolDNA-Binding ProteinsDNA, ComplementaryGene LibraryGenes, ReporterHumansLuciferasesMEF2 Transcription FactorsDNA-Binding ProteinsDNA, ComplementaryLuciferasesMEF2 Transcription FactorsMyogenic Regulatory FactorsNuclear ProteinsOligonucleotidesProtein IsoformsTEAD1 protein, humanTEA Domain Transcription FactorsThymidine KinaseTranscription Factors

Identifiers

PMID12861002
PMCPMC165722
OpenAlexW2137214599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.