Evidence map›Paper›PMID 12857891›Full record

ArticleJournal of virology2003

Transcriptional profiles of latent human immunodeficiency virus in infected individuals: effects of Tat on the host and reservoir.

Xin Lin, Dan Irwin, Satoshi Kanazawa, Laurence Huang, Joseph Romeo, T S Benedict Yen, B Matija Peterlin

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 93 citations in OpenAlex.

  1. Trial
  2. Review
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  5. Article
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  7. Article
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  9. Article
  10. HibeRNAtion: HIV-1 RNA Metabolism and Viral Latency.Frontiers in cellular and infection microbiology · 2022
    Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Anti-Tat immunity defines CD4EBioMedicine · 2021
    Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Xin LinDepartment of Medicine, San Francisco General Hospital, Center for AIDS Research and Department of Pathology, University of California, San Francisco, USA.
Dan Irwin
Satoshi Kanazawa
Laurence Huang
Joseph Romeo
T S Benedict Yen
B Matija Peterlin
University of California, San Francisco · USBipar · FRSan Francisco General Hospital · USSan Francisco State University · US

Funding

TAT TransactivationR01AI049104 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PETERLIN, BORIS MATIJA · 2001 to 2015
$5.3M
NIAID NIH HHS R01 AI049104NIAID NIH HHS R01 AI49104-01
6 · The paper itself

Abstract

The persistence of human immunodeficiency virus (HIV) in optimally treated infected individuals poses a major therapeutic problem. In latently infected cells, one of the observed phenotypes is absent elongation of viral transcription. Thus, the positive elongation factor b (P-TEFb), which is usually recruited by NF-kappaB or Tat, is not present on the HIV long terminal repeat (LTR). Although most attempts to activate these proviruses centered on NF-kappaB, we investigated effects of Tat. To this end, we generated transgenic mice, which secreted a chimera between Tat and the green fluorescent protein from beta cells of the pancreas. This extracellular Tat distributed widely, entered nuclei of resting cells, and specifically transactivated the HIV LTR. No deleterious side effects of Tat were found. Next, we determined that Tat can activate latent proviruses in optimally treated infected individuals. In their cells, T-cell activation or exogenous Tat could induce viral replication equivalently. Thus, P-TEFb could activate the majority of the latent HIV, in this case by Tat.

Indexed as

Transcription, GeneticVirus LatencyAnimalsAntiretroviral Therapy, Highly ActiveCells, CulturedGene Products, tatGreen Fluorescent ProteinsHIV-1HIV InfectionsHumansIslets of LangerhansLeukocytes, MononuclearLuminescent ProteinsMiceMice, TransgenicPancreasGene Products, tatGreen Fluorescent ProteinsLuminescent ProteinsPositive Transcriptional Elongation Factor BProtein Serine-Threonine KinasesRecombinant Fusion Proteinstat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID12857891
PMCPMC165222
OpenAlexW2127672164

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.