Evidence map›Paper›PMID 12857822›Full record

ArticlePlant physiology2003

Arabidopsis UVH6, a homolog of human XPD and yeast RAD3 DNA repair genes, functions in DNA repair and is essential for plant growth.

Zongrang Liu, Suk-Whan Hong, Mindy Escobar, Elizabeth Vierling, David L Mitchell, David W Mount, Jennifer D Hall

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Plant tolerance mechanisms to DNA-damaging UV stress.Journal of experimental botany · 2025
    Review
  3. Article
  4. Review
  5. Review
  6. Formation and Recognition of UV-Induced DNA Damage within Genome Complexity.International journal of molecular sciences · 2020
    Review
  7. Review
  8. Review
  9. Article
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  11. Review
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zongrang LiuDepartments of Molecular and Cellular Biology, University of Arizona, Tucson, Arizona 85721, USA.
Suk-Whan Hong
Mindy Escobar
Elizabeth Vierling
David L Mitchell
David W Mount
Jennifer D Hall
The University of Texas MD Anderson Cancer Center · USUniversity of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To evaluate the genetic control of stress responses in Arabidopsis, we have analyzed a mutant (uvh6-1) that exhibits increased sensitivity to UV light, a yellow-green leaf coloration, and mild growth defects. We have mapped the uvh6-1 locus to chromosome I and have identified a candidate gene, AtXPD, within the corresponding region. This gene shows sequence similarity to the human (Homo sapiens) XPD and yeast (Saccharomyces cerevisiae) RAD3 genes required for nucleotide excision repair. We propose that UVH6 is equivalent to AtXPD because uvh6-1 mutants carry a mutation in a conserved residue of AtXPD and because transformation of uvh6-1 mutants with wild-type AtXPD DNA suppresses both UV sensitivity and other defective phenotypes. Furthermore, the UVH6/AtXPD protein appears to play a role in repair of UV photoproducts because the uvh6-1 mutant exhibits a moderate defect in the excision of UV photoproducts. This defect is also suppressed by transformation with UVH6/AtXPD DNA. We have further identified a T-DNA insertion in the UVH6/AtXPD gene (uvh6-2). Plants carrying homozygous insertions were not detected in analyses of progeny from plants heterozygous for the insertion. Thus, homozygous insertions appear to be lethal. We conclude that the UVH6/AtXPD gene is required for UV resistance and is an essential gene in Arabidopsis.

Indexed as

DNA-Binding ProteinsDNA RepairSaccharomyces cerevisiae ProteinsTATA-Binding Protein Associated FactorsTranscription Factor TFIIDAdenosine TriphosphatasesAmino Acid SequenceArabidopsisArabidopsis ProteinsChromosome MappingDNA, BacterialDNA HelicasesGene Expression ProfilingGene Expression Regulation, PlantGenes, EssentialGenes, PlantAdenosine TriphosphatasesArabidopsis ProteinsDNA, BacterialDNA-Binding ProteinsDNA HelicasesERCC2 protein, humanProteinsRad3 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTAF6 protein, S cerevisiaeTATA-Binding Protein Associated FactorsT-DNATranscription FactorsTranscription Factors, TFIITranscription Factor TFIIDTranscription Factor TFIIHUVH6 protein, ArabidopsisXeroderma Pigmentosum Group D Protein

Identifiers

PMID12857822
PMCPMC167080
OpenAlexW2113844848

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.